RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ANKRD52Q8NB46 1076 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 EPS8L1Q8TE68 723 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 CLEC4CQ8WTT0 213 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 ZNF512Q96ME7 567 aaPredicted RBP10.35□□□□□ -0.75
CLK3-208ENST00000562626 SLC22A12Q96S37 553 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 TTLL2Q9BWV7 592 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 IL37Q9NZH6 218 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 DPP7Q9UHL4 492 aa10.35□□□□□ -0.75
CLK3-208ENST00000562626 ATP8B3O60423 1300 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ATG2BQ96BY7 2078 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 MMEP08473 750 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 TRIM21P19474 475 aaKnown RBP10.34□□□□□ -0.75
CLK3-208ENST00000562626 FSHRP23945 695 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ANXA13P27216 316 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 GPD2P43304 727 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ZNF75DP51815 510 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 SLC5A3P53794 718 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 BCAT1P54687 386 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 MRPS5P82675 430 aaKnown RBP10.34□□□□□ -0.75
CLK3-208ENST00000562626 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ARID5AQ03989 594 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ZP2Q05996 745 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 TAF10Q12962 218 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ELMSAN1Q6PJG2 1045 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 IRF2BP2Q7Z5L9 587 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 VSTM4Q8IW00 320 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 NUP93Q8N1F7 819 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 SLC35F5Q8WV83 523 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 CPLX3Q8WVH0 158 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ATXN2LQ8WWM7 1075 aaKnown RBP10.34□□□□□ -0.75
CLK3-208ENST00000562626 FGF13Q92913 245 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 MCRS1Q96EZ8 462 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 TRMT2BQ96GJ1 504 aaKnown RBP10.34□□□□□ -0.75
CLK3-208ENST00000562626 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 FAM81BQ96LP2 452 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 MYRFLQ96LU7 910 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 SYT11Q9BT88 431 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 NMUR1Q9HB89 426 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 AVENQ9NQS1 362 aaPredicted RBP10.34□□□□□ -0.75
CLK3-208ENST00000562626 ASAH2Q9NR71 780 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 OSER1Q9NX31 292 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 DOCK4Q8N1I0 1966 aa10.34□□□□□ -0.75
CLK3-208ENST00000562626 ITIH6Q6UXX5 1313 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 TRIOO75962 3097 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 FAM92AA1XBS5 289 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 LOC730098B7Z3J9 87 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 XPO1O14980 1071 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 PLEKP08567 350 aaPredicted RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 CSH1P0DML2 217 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 CSH2P0DML3 217 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 SKILP12757 684 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 FCARP24071 287 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 CASP14P31944 242 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 STAT1P42224 750 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 KIF11P52732 1056 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 FMO1Q01740 532 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 ADIGQ0VDE8 80 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 BST2Q10589 180 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 VEPH1Q14D04 833 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 FIGNQ5HY92 759 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 RAB41Q5JT25 222 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 TXNDC8Q6A555 127 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 CYP26C1Q6V0L0 522 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 HFE2Q6ZVN8 426 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 PDZD4Q76G19 769 aaPredicted RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 SCD5Q86SK9 330 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 ITIH5Q86UX2 942 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 DNAAF5Q86Y56 855 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 ELMOD1Q8N336 334 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 C1orf131Q8NDD1 294 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 RIN3Q8TB24 985 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 NECTIN4Q96NY8 510 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 RPP25Q9BUL9 199 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 PHF7Q9BWX1 381 aaPredicted RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 C1QTNF1Q9BXJ1 281 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 ULBP1Q9BZM6 244 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 SMG9Q9H0W8 520 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 SMOC2Q9H3U7 446 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 GMIPQ9P107 970 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 CHORDC1Q9UHD1 332 aaPredicted RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 KIAA1257Q9ULG3 409 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 MRPS23Q9Y3D9 190 aaKnown RBP10.33□□□□□ -0.76
CLK3-208ENST00000562626 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
CLK3-208ENST00000562626 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 PRAMEF12O95522 483 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 USP17L7P0C7H9 530 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 ZDHHC11BP0C7U3 371 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 SETSIPP0DME0 302 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms