RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 RTN3O95197 1032 aaPredicted RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 YWHAQP27348 245 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 CETN1Q12798 172 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 YAF2Q8IY57 180 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 CELF5Q8N6W0 485 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 BPIFB1Q8TDL5 484 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 FBXO32Q969P5 355 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 THAP9Q9H5L6 903 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 HEBP1Q9NRV9 189 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 TDP1Q9NUW8 608 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 IL37Q9NZH6 218 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 TRAV19A0A0A6YYK7 116 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 SHISA7A6NL88 538 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 SOBPA7XYQ1 873 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 STK25O00506 426 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 CHADO15335 359 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 AOC1P19801 751 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 ACO1P21399 889 aaKnown RBP16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 MTIF2P46199 727 aaKnown RBP16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 STARD6P59095 220 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 CCDC183Q5T5S1 534 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 TPRG1Q6ZUI0 275 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 IRF7Q92985 503 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 SLITRK1Q96PX8 696 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 CRACR2AQ9BSW2 395 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 SAMSN1Q9NSI8 373 aaKnown RBP16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 GMIPQ9P107 970 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
CCNDBP1-203ENST00000562553 FAM92AA1XBS5 289 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 RNF225M0QZC1 329 aaPredicted RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 ABL1P00519 1130 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 OAS1P00973 400 aaKnown RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 CKMP06732 381 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 CD72P21854 359 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 RFX1P22670 979 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 PGFP49763 221 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 APBA1Q02410 837 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 PRKCQQ04759 706 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 USP4Q13107 963 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZNF268Q14587 947 aaPredicted RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 ARHGAP17Q68EM7 881 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 PHLDB3Q6NSJ2 640 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 TMEM270Q6UE05 265 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 TTC30AQ86WT1 665 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 ATOH1Q92858 354 aaPredicted RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 DDX23Q9BUQ8 820 aaKnown RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 DUSP16Q9BY84 665 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 DNAI2Q9GZS0 605 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 CHORDC1Q9UHD1 332 aaPredicted RBP16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 PCDHB4Q9Y5E5 795 aa16.26■□□□□ 0.19
CCNDBP1-203ENST00000562553 OLFM2O95897 454 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 CALCAP01258 141 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 CD19P15391 556 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 HDCP19113 662 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 SLC9A1P19634 815 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 PPP3CCP48454 512 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZXDBP98169 803 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 GCNT1Q02742 428 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 TNK2Q07912 1038 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZNF77Q15935 545 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 MAN2A1Q16706 1144 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 GOLGA7BQ2TAP0 167 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 FAM114A1Q8IWE2 563 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 TTC8Q8TAM2 541 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 RNF38Q9H0F5 515 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 TRPV5Q9NQA5 729 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 NFE2L3Q9Y4A8 694 aa16.25■□□□□ 0.19
CCNDBP1-203ENST00000562553 KANSL1LA0AUZ9 987 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 H0Y858 1186 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 TULP2O00295 520 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 CYP26A1O43174 497 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZDHHC11BP0C7U3 371 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 SOX9P48436 509 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 SGO2Q562F6 1265 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 TRIM65Q6PJ69 517 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 RBBP8NLQ8NC74 664 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms