RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 PIAS3Q9Y6X2 628 aa20.49■□□□□ 0.87
TMEM249-202ENST00000562477 FAM170BA6NMN3 283 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 PMM2O15305 246 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 RTN3O95197 1032 aaPredicted RBP20.48■□□□□ 0.87
TMEM249-202ENST00000562477 USP17L7P0C7H9 530 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 PGFP49763 221 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 ARHGAP29Q52LW3 1261 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 TRIM68Q6AZZ1 485 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 IRF2BP1Q8IU81 584 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 UBR7Q8N806 425 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 TMEM176AQ96HP8 235 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 CNOT6LQ96LI5 555 aaKnown RBP20.48■□□□□ 0.87
TMEM249-202ENST00000562477 CSNK1G1Q9HCP0 422 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 GKN1Q9NS71 199 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 IL37Q9NZH6 218 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 EHD2Q9NZN4 543 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 GMIPQ9P107 970 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 CHORDC1Q9UHD1 332 aaPredicted RBP20.48■□□□□ 0.87
TMEM249-202ENST00000562477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.48■□□□□ 0.87
TMEM249-202ENST00000562477 MYH10P35580 1976 aa20.48■□□□□ 0.87
TMEM249-202ENST00000562477 CACNA1IQ9P0X4 2223 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 SOBPA7XYQ1 873 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 HHLA1C9JL84 531 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ARSAP15289 507 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 HDCP19113 662 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ZXDBP98169 803 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 NHLH1Q02575 133 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 USP4Q13107 963 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ZNF268Q14587 947 aaPredicted RBP20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ZNF77Q15935 545 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ZNF852Q6ZMS4 543 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 CREBRFQ8IUR6 639 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 ARHGEF19Q8IW93 802 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 CSGALNACT1Q8TDX6 532 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 SLITRK1Q96PX8 696 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 RNF38Q9H0F5 515 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 KIF9Q9HAQ2 790 aa20.47■□□□□ 0.87
TMEM249-202ENST00000562477 NDRG2Q9UN36 371 aaKnown RBP20.47■□□□□ 0.87
TMEM249-202ENST00000562477 H0Y858 1186 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 FGFR1OPO95684 399 aaKnown RBP20.46■□□□□ 0.87
TMEM249-202ENST00000562477 OAS1P00973 400 aaKnown RBP20.46■□□□□ 0.87
TMEM249-202ENST00000562477 AFPP02771 609 aaKnown RBP20.46■□□□□ 0.87
TMEM249-202ENST00000562477 CCDC192P0DO97 292 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 PLA2G5P39877 138 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 KPNA1P52294 538 aaPredicted RBP20.46■□□□□ 0.87
TMEM249-202ENST00000562477 PTPN5P54829 565 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 SH3RF2Q8TEC5 729 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 FAM122AQ96E09 287 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 NT5C1BQ96P26 610 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 PRRX2Q99811 253 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 FAM83CQ9BQN1 747 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 HPS4Q9NQG7 708 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 FAM86C1Q9NVL1 165 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 THG1LQ9NWX6 298 aaKnown RBP20.46■□□□□ 0.87
TMEM249-202ENST00000562477 SMPD4Q9NXE4 827 aa20.46■□□□□ 0.87
TMEM249-202ENST00000562477 PIEZO1Q92508 2521 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 OTOL1A6NHN0 477 aaPredicted RBP20.45■□□□□ 0.86
TMEM249-202ENST00000562477 P4HA2O15460 535 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 CALCAP01258 141 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 TRIM21P19474 475 aaKnown RBP20.45■□□□□ 0.86
TMEM249-202ENST00000562477 PPP3CCP48454 512 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 PLCB2Q00722 1185 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 MTF1Q14872 753 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 TXNDC11Q6PKC3 985 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 RRAGAQ7L523 313 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 TTC39CQ8N584 583 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 EHBP1Q8NDI1 1231 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 FAM3CQ92520 227 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 PHOX2BQ99453 314 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 INTS2Q9H0H0 1204 aaKnown RBP20.45■□□□□ 0.86
TMEM249-202ENST00000562477 EBF3Q9H4W6 596 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 ARHGAP26Q9UNA1 814 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 WNT6Q9Y6F9 365 aa20.45■□□□□ 0.86
TMEM249-202ENST00000562477 KIF26AQ9ULI4 1882 aaPredicted RBP20.45■□□□□ 0.86
TMEM249-202ENST00000562477 FAM92AA1XBS5 289 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 SCAMP3O14828 347 aaKnown RBP20.44■□□□□ 0.86
TMEM249-202ENST00000562477 ACO1P21399 889 aaKnown RBP20.44■□□□□ 0.86
TMEM249-202ENST00000562477 TBXAS1P24557 533 aaPredicted RBP20.44■□□□□ 0.86
TMEM249-202ENST00000562477 NUBP1P53384 320 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 FZD5Q13467 585 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 PPM1KQ8N3J5 372 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 CRACR2AQ9BSW2 395 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 DUSP16Q9BY84 665 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 CCSER2Q9H7U1 834 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 CPQQ9Y646 472 aa20.44■□□□□ 0.86
TMEM249-202ENST00000562477 SPECC1L-ADORA2AF8WAN1 911 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 LEFTY2O00292 366 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 MAN2B1O00754 1011 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 CYP26A1O43174 497 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 COCHO43405 550 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 OLFM2O95897 454 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 ZDHHC11BP0C7U3 371 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 CD19P15391 556 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 CTHP32929 405 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 YWHAEP62258 255 aaKnown RBP20.43■□□□□ 0.86
TMEM249-202ENST00000562477 SLC7A9P82251 487 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 CETN1Q12798 172 aa20.43■□□□□ 0.86
TMEM249-202ENST00000562477 TPD52L1Q16890 204 aaPredicted RBP20.43■□□□□ 0.86
TMEM249-202ENST00000562477 GOLGA7BQ2TAP0 167 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms