RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 BTKQ06187 659 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 PPIDQ08752 370 aaKnown RBP13.88□□□□□ -0.19
CLK3-206ENST00000562078 KCTD21Q4G0X4 260 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CBWD6Q4V339 395 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 XKR9Q5GH70 373 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CBWD3Q5JTY5 395 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CBWD5Q5RIA9 395 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
CLK3-206ENST00000562078 ARPINQ7Z6K5 226 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
CLK3-206ENST00000562078 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 KLHL4Q9C0H6 718 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 TRABDQ9H4I3 376 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 TAS2R14Q9NYV8 317 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SPTLC1O15269 473 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 BIRC5O15392 142 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLK3-206ENST00000562078 CLPTM1O96005 669 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ATP6V1B1P15313 513 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SFNP31947 248 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ITGA8P53708 1063 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 JAM2P57087 298 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ACTR3P61158 418 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SP4Q02446 784 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 KRT17Q04695 432 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 LPIN1Q14693 890 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CCDC62Q6P9F0 684 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 RNF111Q6ZNA4 994 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 NLRX1Q86UT6 975 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CHORDC1Q9UHD1 332 aaPredicted RBP13.88□□□□□ -0.19
CLK3-206ENST00000562078 ZNF148Q9UQR1 794 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ZNFX1Q9P2E3 1918 aaKnown RBP13.88□□□□□ -0.19
CLK3-206ENST00000562078 B2RBV5 119 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SLC16A4O15374 487 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 HSPA6P17066 643 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 GJA5P36382 358 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PEX3P56589 373 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PDE1BQ01064 536 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 MYL7Q01449 175 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 RELAQ04206 551 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 BFSP1Q12934 665 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 KIF22Q14807 665 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 ACAP1Q15027 740 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 THOC7Q6I9Y2 204 aaKnown RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 NET1Q7Z628 596 aaPredicted RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 PYDC1Q8WXC3 89 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 GPRASP2Q96D09 838 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 HNRNPABQ99729 332 aaKnown RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 TUBB6Q9BUF5 446 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 ACAD9Q9H845 621 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 FAF1Q9UNN5 650 aaPredicted RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 FBP2O00757 339 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SORBS3O60504 671 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PEX10O60683 326 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 TRMUO75648 421 aaKnown RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 PEX2P28328 305 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 FKBP1BP68106 108 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 CLUL1Q15846 466 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
CLK3-206ENST00000562078 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 C1orf146Q5VVC0 180 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 LVRNQ6Q4G3 990 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SLC9A9Q8IVB4 645 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 ARHGAP24Q8N264 748 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 C1orf54Q8WWF1 131 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SKA1Q96BD8 255 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SNX27Q96L92 541 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 ACCSQ96QU6 501 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 CBWD1Q9BRT8 395 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 OSBPL8Q9BZF1 889 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 WHRNQ9P202 907 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 SLC7A8Q9UHI5 535 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PCDHGB4Q9UN71 923 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 NUB1Q9Y5A7 615 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 PCDHGB5Q9Y5G0 923 aa13.87□□□□□ -0.19
CLK3-206ENST00000562078 UNCXA6NJT0 531 aa13.86□□□□□ -0.19
CLK3-206ENST00000562078 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLK3-206ENST00000562078 STRNO43815 780 aa13.86□□□□□ -0.19
CLK3-206ENST00000562078 RGS20O76081 388 aa13.86□□□□□ -0.19
CLK3-206ENST00000562078 TFPTP0C1Z6 253 aa13.86□□□□□ -0.19
CLK3-206ENST00000562078 DLATP10515 647 aaKnown RBP13.86□□□□□ -0.19
CLK3-206ENST00000562078 OSBPP22059 807 aa13.86□□□□□ -0.19
CLK3-206ENST00000562078 GCAP28676 217 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms