RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MECRQ9BV79 373 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNF518BQ9C0D4 1074 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 A0A0B4J269 797 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 CCDC195A0A1B0GUA6 201 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 TRIM49D1C9J1S8 452 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 SMAPO00193 183 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 AP1G2O75843 785 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 ASS1P00966 412 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 GSTA2P09210 222 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 UBTFL6P0CB48 400 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 KCNA2P16389 499 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 TSHRP16473 764 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 XKR3Q5GH77 459 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 EGFL6Q8IUX8 553 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 ARID3BQ8IVW6 561 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 EMC1Q8N766 993 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 SPATA18Q8TC71 538 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 TFAP2BQ92481 460 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 LPAR1Q92633 364 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 MTMR12Q9C0I1 747 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 RNF146Q9NTX7 359 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 TJP2Q9UDY2 1190 aa14.58□□□□□ -0.08
VPS9D1-202ENST00000561976 AVILO75366 819 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 EIF4BP23588 611 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 ZBTB33Q86T24 672 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 SCUBE1Q8IWY4 988 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 GALNT15Q8N3T1 639 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 ARFGAP1Q8N6T3 406 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 PHC3Q8NDX5 983 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 FGD4Q96M96 766 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 ACAP3Q96P50 834 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 GBP5Q96PP8 586 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 TRIM4Q9C037 500 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 KRT82Q9NSB4 513 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 MARCOQ9UEW3 520 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 BAG2O95816 211 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 TRPC3Q13507 836 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 TTC39BQ5VTQ0 682 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 STYK1Q6J9G0 422 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 DENND1BQ6P3S1 775 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 CDHR3Q6ZTQ4 885 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 KBTBD2Q8IY47 623 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 UBR7Q8N806 425 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 RBM15BQ8NDT2 890 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 FBXO27Q8NI29 283 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 THTPAQ9BU02 230 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 SLC13A1Q9BZW2 595 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 NIF3L1Q9GZT8 377 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 WDR35Q9P2L0 1181 aa14.57□□□□□ -0.08
VPS9D1-202ENST00000561976 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 MAFGO15525 162 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 APOC2P02655 101 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TNFSF9P41273 254 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 NAMPTP43490 491 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TGFB2P61812 414 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TAF5Q15542 800 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 PTPN20Q4JDL3 420 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 PRPF39Q86UA1 669 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 SLC26A11Q86WA9 606 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TREML1Q86YW5 311 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 CLPTM1LQ96KA5 538 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RILPQ96NA2 401 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TTC1Q99614 292 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 CNTN3Q9P232 1028 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RGPD3A6NKT7 1758 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RGPD4Q7Z3J3 1758 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 SPECC1L-ADORA2AF8WAN1 911 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 MAGEC1O60732 1142 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 KRT37O76014 449 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RAP1GDS1P52306 607 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ROR1Q01973 937 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 BST1Q10588 318 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ATG16L1Q676U5 607 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 XRRA1Q6P2D8 792 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TRIM42Q8IWZ5 723 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 E2F7Q96AV8 911 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 DDX50Q9BQ39 737 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 POLIQ9UNA4 740 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TEX264Q9Y6I9 313 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 PIGRP01833 764 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 EDN1P05305 212 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ZCCHC18P0CG32 403 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ANPEPP15144 967 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ALDH18A1P54886 795 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 INHBEP58166 350 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 WDR78Q5VTH9 848 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ABHD15Q6UXT9 468 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 IZUMO2Q6UXV1 221 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 RIPOR1Q6ZS17 1223 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms