RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 SNRPFP62306 86 aaKnown RBP28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 NR1H3Q13133 447 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 ORC1Q13415 861 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 DMC1Q14565 340 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 KIAA0895Q8NCT3 520 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 SYAP1Q96A49 352 aaPredicted RBP28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 EXOC4Q96A65 974 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 MED10Q9BTT4 135 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 ACTN4O43707 911 aaKnown RBP28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 KLRC4O43908 158 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 NOP14P78316 857 aaKnown RBP28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 STK4Q13043 487 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 FBXO43Q4G163 708 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 AASDHQ4L235 1098 aaPredicted RBP28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 CACNA2D4Q7Z3S7 1137 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 C12orf56Q8IXR9 622 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.78■■■□□ 2.21e-15■■■■■ 72.7
SNRPA1-215ENST00000561187 CFAP97Q9P2B7 532 aa28.78■■■□□ 2.2
SNRPA1-215ENST00000561187 DCLK1O15075 740 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 CYP17A1P05093 508 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 MBL2P11226 248 aaPredicted RBP28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 KMT5BQ4FZB7 885 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 FBXO32Q969P5 355 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 PAGE5Q96GU1 130 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 SLITRK1Q96PX8 696 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 KCNK16Q96T55 309 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 SDCBP2Q9H190 292 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 EHD2Q9NZN4 543 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 INVSQ9Y283 1065 aa28.77■■■□□ 2.2
SNRPA1-215ENST00000561187 TPRP12270 2363 aaKnown RBP28.76■■■□□ 2.2
SNRPA1-215ENST00000561187 SLC30A4O14863 429 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 ATICP31939 592 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 OPRD1P41143 372 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 DLG4P78352 724 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 NCOA4Q13772 614 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 C2orf27AQ580R0 203 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 ZNF667Q5HYK9 610 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 FAM35AQ86V20 835 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 SFTPA1Q8IWL2 248 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 ACDQ96AP0 544 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 RXFP3Q9NSD7 469 aa28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 CGNQ9P2M7 1197 aaKnown RBP28.76■■■□□ 2.19
SNRPA1-215ENST00000561187 A0A1B0GVL5 298 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 EPN2O95208 641 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 STAU1O95793 577 aaKnown RBP28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 OAS1P00973 400 aaKnown RBP28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 SLFN14P0C7P3 912 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 TCF3P15923 654 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 PFKFB1P16118 471 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 SLC7A9P82251 487 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 GAB4Q2WGN9 574 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 PPM1JQ5JR12 505 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 SYT13Q7L8C5 426 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 TTC30AQ86WT1 665 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 CCDC33Q8N5R6 958 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 C12orf50Q8NA57 414 aaPredicted RBP28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 SCAMP5Q8TAC9 235 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 PARD3BQ8TEW8 1205 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 CEP295NLQ96MC4 621 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 TPSD1Q9BZJ3 242 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 CFAP45Q9UL16 551 aa28.75■■■□□ 2.19
SNRPA1-215ENST00000561187 VNN1O95497 513 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 APBB3O95704 486 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 DGKEP52429 567 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 NUP93Q8N1F7 819 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 CAMKK1Q8N5S9 505 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 TSTD1Q8NFU3 115 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 GOLGA5Q8TBA6 731 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 KRT82Q9NSB4 513 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 HMGXB4Q9UGU5 601 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 MYOFQ9NZM1 2061 aa28.74■■■□□ 2.19
SNRPA1-215ENST00000561187 ATP8B3O60423 1300 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CCDC163A0A0D9SF12 145 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 OLFM2O95897 454 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CCDC130P13994 396 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 YWHAQP27348 245 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 SLC6A11P48066 632 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 SLC5A3P53794 718 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 KDSRQ06136 332 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 MESP2Q0VG99 397 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CEP135Q66GS9 1140 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 SPOPLQ6IQ16 392 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 ACOT1Q86TX2 421 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 C12orf40Q86WS4 652 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CNTNAP3BQ96NU0 1288 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CNTNAP3Q9BZ76 1288 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 ZDHHC4Q9NPG8 344 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 CHORDC1Q9UHD1 332 aaPredicted RBP28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 RCOR1Q9UKL0 485 aa28.73■■■□□ 2.19
SNRPA1-215ENST00000561187 K7EQS6 105 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 C4BPAP04003 597 aaKnown RBP28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 NR3C1P04150 777 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 PFKLP17858 780 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 GBP1P32455 592 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 DHCR24Q15392 516 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 PLK5Q496M5 336 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 TCEAL6Q6IPX3 200 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 ANO7Q6IWH7 933 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 USP33Q8TEY7 942 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 TCEAL3Q969E4 200 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms