RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 SEMA4DQ92854 862 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 SLC22A12Q96S37 553 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 TMEM30AQ9NV96 361 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
SPG21-214ENST00000561088 PATJQ8NI35 1801 aa13.02□□□□□ -0.33
SPG21-214ENST00000561088 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CILPO75339 1184 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CTHP32929 405 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 RPS9P46781 194 aaKnown RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 MLLT6P55198 1093 aaPredicted RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 STX17P56962 302 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 YWHAEP62258 255 aaKnown RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 AMPD2Q01433 879 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 CETN1Q12798 172 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 RUNX3Q13761 415 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CBWD6Q4V339 395 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CBWD3Q5JTY5 395 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 CBWD5Q5RIA9 395 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 SCAMP5Q8TAC9 235 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 ATP2A3Q93084 1043 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
SPG21-214ENST00000561088 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 WNT6Q9Y6F9 365 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 F5P12259 2224 aa13.01□□□□□ -0.33
SPG21-214ENST00000561088 GFRA3O60609 400 aa13□□□□□ -0.33
SPG21-214ENST00000561088 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
SPG21-214ENST00000561088 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
SPG21-214ENST00000561088 ARSAP15289 507 aa13□□□□□ -0.33
SPG21-214ENST00000561088 PFKLP17858 780 aa13□□□□□ -0.33
SPG21-214ENST00000561088 LRMPQ12912 555 aa13□□□□□ -0.33
SPG21-214ENST00000561088 USP4Q13107 963 aa13□□□□□ -0.33
SPG21-214ENST00000561088 PON2Q15165 354 aa13□□□□□ -0.33
SPG21-214ENST00000561088 ZNF77Q15935 545 aa13□□□□□ -0.33
SPG21-214ENST00000561088 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
SPG21-214ENST00000561088 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
SPG21-214ENST00000561088 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
SPG21-214ENST00000561088 ZC3H3Q8IXZ2 948 aaKnown RBP13□□□□□ -0.33
SPG21-214ENST00000561088 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
SPG21-214ENST00000561088 OVCA2Q8WZ82 227 aa13□□□□□ -0.33
SPG21-214ENST00000561088 SLC35C1Q96A29 364 aa13□□□□□ -0.33
SPG21-214ENST00000561088 EXOC4Q96A65 974 aa13□□□□□ -0.33
SPG21-214ENST00000561088 CLDN23Q96B33 292 aa13□□□□□ -0.33
SPG21-214ENST00000561088 CYFIP2Q96F07 1278 aa13□□□□□ -0.33
SPG21-214ENST00000561088 TWNKQ96RR1 684 aa13□□□□□ -0.33
SPG21-214ENST00000561088 HNRNPABQ99729 332 aaKnown RBP13□□□□□ -0.33
SPG21-214ENST00000561088 SMOQ99835 787 aa13□□□□□ -0.33
SPG21-214ENST00000561088 ARID3AQ99856 593 aa13□□□□□ -0.33
SPG21-214ENST00000561088 FBXO44Q9H4M3 255 aa13□□□□□ -0.33
SPG21-214ENST00000561088 CISHQ9NSE2 258 aa13□□□□□ -0.33
SPG21-214ENST00000561088 GMIPQ9P107 970 aa13□□□□□ -0.33
SPG21-214ENST00000561088 GCNT4Q9P109 453 aa13□□□□□ -0.33
SPG21-214ENST00000561088 ARHGAP26Q9UNA1 814 aa13□□□□□ -0.33
SPG21-214ENST00000561088 CPQQ9Y646 472 aa13□□□□□ -0.33
SPG21-214ENST00000561088 PIEZO1Q92508 2521 aa13□□□□□ -0.33
SPG21-214ENST00000561088 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 GNA14O95837 355 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 SP9P0CG40 484 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 BMP6P22004 513 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 NBL1P41271 181 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 FMO5P49326 533 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 SLC8A3P57103 927 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 GRSF1Q12849 480 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPG21-214ENST00000561088 MTAPQ13126 283 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 NR1H3Q13133 447 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 HECTD3Q5T447 861 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 TXNDC11Q6PKC3 985 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPG21-214ENST00000561088 OSCP1Q8WVF1 389 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 TATDN2Q93075 761 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 NKD2Q969F2 451 aaPredicted RBP12.99□□□□□ -0.33
SPG21-214ENST00000561088 FAXDC2Q96IV6 333 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
SPG21-214ENST00000561088 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 CHRDQ9H2X0 955 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 HPS4Q9NQG7 708 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
SPG21-214ENST00000561088 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 CHORDC1Q9UHD1 332 aaPredicted RBP12.99□□□□□ -0.33
SPG21-214ENST00000561088 R4GN57 208 aa12.99□□□□□ -0.33
SPG21-214ENST00000561088 SHISA7A6NL88 538 aa12.98□□□□□ -0.33
SPG21-214ENST00000561088 LEFTY2O00292 366 aa12.98□□□□□ -0.33
SPG21-214ENST00000561088 BEST1O76090 585 aa12.98□□□□□ -0.33
SPG21-214ENST00000561088 NFATC1O95644 943 aa12.98□□□□□ -0.33
SPG21-214ENST00000561088 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
SPG21-214ENST00000561088 CD19P15391 556 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms