RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 AJAP1Q9UKB5 411 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 BLOC1S6Q9UL45 172 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TMPRSS11EQ9UL52 423 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PALD1Q9ULE6 856 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 USP22Q9UPT9 525 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DNAJC16Q9Y2G8 782 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 GDAQ9Y2T3 454 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ANGPTL3Q9Y5C1 460 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 POMT1Q9Y6A1 747 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 AP1M2Q9Y6Q5 423 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 FAM169AQ9Y6X4 670 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 IGF1RP08069 1367 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ABCC9O60706 1549 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A0A0A0MRY4 1105 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A0A0U1RQK1 487 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 hCG_1809904A0A1W2PP81 198 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PPE2 198 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PQ09 198 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PR64 198 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF320A2RRD8 509 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 C16orf96A6NNT2 1141 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF785A8K8V0 405 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PRR33A8MZF0 331 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 H0Y858 1186 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 H7C4K7 107 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 J3KTA2 159 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 M0QYG6 137 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SH2B2O14492 632 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF263O14978 683 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DYRK3O43781 588 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB14O43829 449 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DIAPH2O60879 1101 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SRGAP2O75044 1071 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DGAT1O75907 488 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PNPP00491 289 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 F9P00740 461 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 AVPP01185 164 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 IGHDP01880 384 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SLC4A1P02730 911 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 A1BGP04217 495 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ADRB2P07550 413 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ANXA6P08133 673 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ABCB1P08183 1280 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 CELA3BP08861 270 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CYP2C9P11712 490 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 GAP43P17677 238 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ERCC2P18074 760 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 LAG3P18627 525 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 BTF3P20290 206 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 TGM1P22735 817 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CASQ1P31415 396 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ACSL1P33121 698 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 GP5P40197 560 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 GSTM5P46439 218 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PCP4P48539 62 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PTDSS1P48651 473 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 TDO2P48775 406 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SLC11A2P49281 568 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 FLT3LGP49771 235 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 NT5C2P49902 561 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MTHFSP49914 203 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CLCN7P51798 805 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF41P51814 821 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 PRKAG1P54619 331 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RAD23AP54725 363 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SLC12A2P55011 1212 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 EIF3BP55884 814 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 UCP3P55916 312 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 UBASH3AP57075 661 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RTP1P59025 263 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RPL7AP62424 266 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 ARF5P84085 180 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SF3A3Q12874 501 aaKnown RBP eCLIP2.19□□□□□ -2.06
RTF1-207ENST00000561076 MRPL28Q13084 256 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 AIMP2Q13155 320 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 RCN2Q14257 317 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SEMA3AQ14563 771 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 NFIXQ14938 502 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 NAA25Q14CX7 972 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MORF4L2Q15014 288 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 E2F5Q15329 346 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MED22Q15528 200 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KYNUQ16719 465 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 WDR72Q3MJ13 1102 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZSCAN23Q3MJ62 389 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 TBRG1Q3YBR2 411 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PABPC1LQ4VXU2 614 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 SETMARQ53H47 684 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 KRTCAP3Q53RY4 240 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SGO2Q562F6 1265 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RUNDC3AQ59EK9 446 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 C9orf152Q5JTZ5 239 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PLEKHS1Q5SXH7 462 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ARMC4Q5T2S8 1044 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 EMC10Q5UCC4 262 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KAZNQ674X7 775 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RAP1GAP2Q684P5 730 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KRT40Q6A162 431 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PLAG1Q6DJT9 500 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MFSD5Q6N075 450 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms