RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LGR5O75473 907 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 ATF2P15336 505 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 CD151P48509 253 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 XIAPP98170 497 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 GRM2Q14416 872 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 RASA2Q15283 850 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 TRMT5Q32P41 509 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 CCDC62Q6P9F0 684 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 IZUMO2Q6UXV1 221 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 NET1Q7Z628 596 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 PDCD7Q8N8D1 485 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 OR5B17Q8NGF7 314 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 GFM2Q969S9 779 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 CFAP57Q96MR6 1250 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 GPR20Q99678 358 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 GPAMQ9HCL2 828 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 TXNRD2Q9NNW7 524 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 SLCO1B3Q9NPD5 702 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 METTL5Q9NRN9 209 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 NDE1Q9NXR1 346 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 TBK1Q9UHD2 729 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 PGK2P07205 417 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ZCCHC18P0CG32 403 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 CLCN2P51788 898 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 EFNA5P52803 228 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ITGA8P53708 1063 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 AP2B1P63010 937 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 HPCAP84074 193 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 IER5Q5VY09 327 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 MOB2Q70IA6 237 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ADGRG6Q86SQ4 1221 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 CPA5Q8WXQ8 436 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 TRIM11Q96F44 468 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 OSBPL8Q9BZF1 889 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 TRABDQ9H4I3 376 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 RBPJLQ9UBG7 517 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ANAPC5Q9UJX4 755 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 KCNH4Q9UQ05 1017 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 CNTN6Q9UQ52 1028 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 WDR37Q9Y2I8 494 aa14.59□□□□□ -0.07
RABGGTA-220ENST00000560998 ZBTB42B2RXF5 422 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 FSCN2O14926 492 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 MSCO60682 206 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 HARSP12081 509 aaKnown RBP14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 ANPEPP15144 967 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 IVDP26440 423 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 MAPK4P31152 587 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 NEK3P51956 506 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 CENPCQ03188 943 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 SEZ6Q53EL9 994 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 CELF3Q5SZQ8 465 aaKnown RBP14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 BRSK2Q8IWQ3 736 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 HOMEZQ8IX15 550 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 MRPL4Q9BYD3 311 aaKnown RBP14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 RNF181Q9P0P0 153 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 ANAPC7Q9UJX3 599 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 ZNF232Q9UNY5 417 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 NUB1Q9Y5A7 615 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 PCDHB4Q9Y5E5 795 aa14.58□□□□□ -0.07
RABGGTA-220ENST00000560998 DNAJC25-GNG10A0A024R161 153 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 FOXO6A8MYZ6 492 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 CLDN3O15551 220 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 FAM189A1O60320 539 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 RRM1P23921 792 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 TBXAS1P24557 533 aaPredicted RBP14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 CETN2P41208 172 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 NOP14P78316 857 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 LAMTOR4Q0VGL1 99 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 PPIL2Q13356 520 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 THOC5Q13769 683 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 NCOA4Q13772 614 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 HSDL1Q3SXM5 330 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 SGO2Q562F6 1265 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 TRIM72Q6ZMU5 477 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 TRIM50Q86XT4 487 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 DTX3LQ8TDB6 740 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 SPOCK2Q92563 424 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 ZNF75CPQ92670 426 aaPredicted RBP14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 CDCA5Q96FF9 252 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 IQCGQ9H095 443 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 TIMMDC1Q9NPL8 285 aa14.58□□□□□ -0.08
RABGGTA-220ENST00000560998 MCM3APO60318 1980 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 IGKV6-21A0A0C4DH24 114 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 HNRNPRO43390 633 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 GAS2O43903 313 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 FKBP6O75344 327 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 TOM1L1O75674 476 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 CIB2O75838 187 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 RARBP10826 455 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 YY1P25490 414 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 TNFSF9P41273 254 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 NSFP46459 744 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 KCNJ1P48048 391 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms