RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CRTAC1Q9NQ79 661 aa14.46□□□□□ -0.09
SMAD3-214ENST00000560402 TRPM5Q9NZQ8 1165 aa14.46□□□□□ -0.09
SMAD3-214ENST00000560402 PCDHGA5Q9Y5G8 931 aa14.46□□□□□ -0.09
SMAD3-214ENST00000560402 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-214ENST00000560402 ATP2C2O75185 946 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 DLATP10515 647 aaKnown RBP14.45□□□□□ -0.1
SMAD3-214ENST00000560402 HDCP19113 662 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 TNNI1P19237 187 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 BDNFP23560 247 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 ATICP31939 592 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 HOXD13P35453 343 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 GRIK1P39086 918 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 LIMK1P53667 647 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 NOP14P78316 857 aaKnown RBP14.45□□□□□ -0.1
SMAD3-214ENST00000560402 CYP27A1Q02318 531 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 CYP24A1Q07973 514 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 BMT2Q1RMZ1 405 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 SCARA3Q6AZY7 606 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 SYT13Q7L8C5 426 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 C12orf56Q8IXR9 622 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-214ENST00000560402 HPS3Q969F9 1004 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 PDLIM2Q96JY6 352 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 C8orf48Q96LL4 319 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 ELOVL4Q9GZR5 314 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 SNX25Q9H3E2 840 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 WNT6Q9Y6F9 365 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 SPTBN2O15020 2390 aa14.45□□□□□ -0.1
SMAD3-214ENST00000560402 ATP8B3O60423 1300 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 C2orf78A6NCI8 922 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 SMTNL1A8MU46 457 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 AXIN1O15169 862 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 TGFB1I1O43294 461 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 OLFM2O95897 454 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 TPM3P06753 285 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 LMO2P25791 158 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 RAP1GAPP47736 663 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 GALK1P51570 392 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 CYP2J2P51589 502 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 MDH1BQ5I0G3 518 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 DDX42Q86XP3 938 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMAD3-214ENST00000560402 C12orf50Q8NA57 414 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-214ENST00000560402 PDZD8Q8NEN9 1154 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 RPLP0P6Q8NHW5 317 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 GOLGA5Q8TBA6 731 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 SCFD1Q8WVM8 642 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 ZC3H10Q96K80 434 aaKnown RBP14.44□□□□□ -0.1
SMAD3-214ENST00000560402 SLC22A12Q96S37 553 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 CYP2S1Q96SQ9 504 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 CBX8Q9HC52 389 aa14.44□□□□□ -0.1
SMAD3-214ENST00000560402 PVALEFA0A1B0GWK0 134 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 DCDC2BA2VCK2 349 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 F8VP50 259 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 SLC9A3R1O14745 358 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-214ENST00000560402 POLR2DO15514 142 aaKnown RBP14.43□□□□□ -0.1
SMAD3-214ENST00000560402 APBB3O95704 486 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 ADRB1P08588 477 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 PDGFRBP09619 1106 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 ZNF806P0C7X5 589 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 GNL1P36915 607 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-214ENST00000560402 AP3M2P53677 418 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 SLC7A9P82251 487 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 TRPC3Q13507 836 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 WDR72Q3MJ13 1102 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 AASDHQ4L235 1098 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-214ENST00000560402 C11orf74Q86VG3 221 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 TRIML1Q8N9V2 468 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 OR6B3Q8NGW1 331 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 SLITRK1Q96PX8 696 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 BPIFA3Q9BQP9 254 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 MRPL45Q9BRJ2 306 aaKnown RBP14.43□□□□□ -0.1
SMAD3-214ENST00000560402 VRTNQ9H8Y1 702 aa14.43□□□□□ -0.1
SMAD3-214ENST00000560402 ZNF840PA6NDX5 716 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 LEFTY2O00292 366 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 RTN3O95197 1032 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 OAS1P00973 400 aaKnown RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 EIF2DP41214 584 aaKnown RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 DMC1Q14565 340 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 ELF2Q15723 593 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 KNOP1Q1ED39 458 aaKnown RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 PPM1JQ5JR12 505 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 TDRD10Q5VZ19 366 aaKnown RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 NELFCDQ8IXH7 590 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 RDH13Q8NBN7 331 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 B3GALNT2Q8NCR0 500 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 TTC16Q8NEE8 873 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 OVCA2Q8WZ82 227 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 SMARCE1Q969G3 411 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 CCDC127Q96BQ5 260 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 ARRDC1-AS1Q9H2J1 176 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 FBRSL1Q9HCM7 1045 aaKnown RBP14.42□□□□□ -0.1
SMAD3-214ENST00000560402 EBF1Q9UH73 591 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 PLXND1Q9Y4D7 1925 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 MYH10P35580 1976 aa14.42□□□□□ -0.1
SMAD3-214ENST00000560402 NUP205Q92621 2012 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 A8MXQ7 604 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 CLIC2O15247 247 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 EXOC3O60645 756 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms