RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 JAMLQ86YT9 394 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ZCWPW1Q9H0M4 648 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 VWDEQ8N2E2 1590 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 OXCT1P55809 520 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 VGLL4Q14135 290 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CCDC85BQ15834 202 aaPredicted RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 FAM172AQ8WUF8 416 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CARD9Q9H257 536 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 DTNAQ9Y4J8 743 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ENO1P06733 434 aaKnown RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 NCALDP61601 193 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ADGRA1Q86SQ6 560 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 PHACTR4Q8IZ21 702 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SERPINB4P48594 390 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ITGA8P53708 1063 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 INPP5AQ14642 412 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SEC23AQ15436 765 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SPACA6W5XKT8 324 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SOAT1P35610 550 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 KCNT1Q5JUK3 1230 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PNKPQ96T60 521 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 ARHGAP26Q9UNA1 814 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CDY1Q9Y6F8 540 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PCDH8O95206 1070 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PLD1Q13393 1074 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 C2CD6Q53TS8 623 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TC2NQ8N9U0 490 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PGLYRP2Q96PD5 576 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CLPBQ9H078 707 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CCR1P32246 355 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PSEN2P49810 448 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TKTL1P51854 596 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PTPN11Q06124 597 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CAMK2GQ13555 558 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 DMC1Q14565 340 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 STAMBPL1Q96FJ0 436 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 RBM12Q9NTZ6 932 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 RIC8BQ9NVN3 520 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CDYLQ9Y232 598 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TIMM13Q9Y5L4 95 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CBX4O00257 560 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 FKBP9O95302 570 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PLA2G4AP47712 749 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 GEMIN4P57678 1058 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 FKBP9P1Q75LS8 142 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 GPRC5DQ9NZD1 345 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PCDHB5Q9Y5E4 795 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 DAB2P98082 770 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 NLRP14Q86W24 1093 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 DNAJC7Q99615 494 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 CELF4Q9BZC1 486 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 ERAP2Q6P179 960 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
TRAF3-208ENST00000560371 ECT2Q9H8V3 914 aa13.94□□□□□ -0.18
TRAF3-208ENST00000560371 A0A087X0T9 212 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 FAM228BP0C875 321 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 GRK3P35626 688 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 PGM1P36871 562 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 RARRES1P49788 294 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 STARD3Q14849 445 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SLC47A2Q86VL8 602 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 NAT9Q9BTE0 207 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 OSGEPL1Q9H4B0 414 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SRP72O76094 671 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 FKBP1AP62942 108 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 FAXCQ5TGI0 409 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 STX19Q8N4C7 294 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 PFDN1O60925 122 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 VSNL1P62760 191 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 IKBKEQ14164 716 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 KYNUQ16719 465 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SV2AQ7L0J3 742 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 LRRC6Q86X45 466 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 RIBC1Q8N443 379 aaPredicted RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 TMC2Q8TDI7 906 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 TAS1R2Q8TE23 839 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 BTN2A2Q8WVV5 523 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms