RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 EZH1Q92800 747 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-213ENST00000559399 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 B3GNT5Q9BYG0 378 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 TMEM30AQ9NV96 361 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 SMPD4Q9NXE4 827 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CPQQ9Y646 472 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 ATP8B3O60423 1300 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 APBB3O95704 486 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 OAS1P00973 400 aaKnown RBP15.88■□□□□ 0.13
LRRC28-213ENST00000559399 PFKFB1P16118 471 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 PSMD2Q13200 908 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 KMT5BQ4FZB7 885 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 SCARA5Q6ZMJ2 495 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 DDX42Q86XP3 938 aaKnown RBP eCLIP15.88■□□□□ 0.13
LRRC28-213ENST00000559399 NUP93Q8N1F7 819 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 PDZD8Q8NEN9 1154 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 TMEM174Q8WUU8 243 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 LOXL4Q96JB6 756 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 TNIP3Q96KP6 325 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 RNF38Q9H0F5 515 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
LRRC28-213ENST00000559399 DMAC2Q9NW81 257 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
LRRC28-213ENST00000559399 CEP250Q9BV73 2442 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 KIF26AQ9ULI4 1882 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-213ENST00000559399 DCDC2BA2VCK2 349 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 SLC9A3R1O14745 358 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-213ENST00000559399 SLC30A4O14863 429 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 AXIN1O15169 862 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-213ENST00000559399 C4BPAP04003 597 aaKnown RBP15.87■□□□□ 0.13
LRRC28-213ENST00000559399 NR3C1P04150 777 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 MYL1P05976 194 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 P4HA1P13674 534 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 CMA1P23946 247 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 YWHAQP27348 245 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 CDH8P55286 799 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 DMC1Q14565 340 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 FILIP1Q7Z7B0 1213 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 FAM35AQ86V20 835 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 KBTBD6Q86V97 674 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 OVCA2Q8WZ82 227 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 FBXO32Q969P5 355 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 MED10Q9BTT4 135 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 KCTD10Q9H3F6 313 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 DMAP1Q9NPF5 467 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-213ENST00000559399 CFAP97Q9P2B7 532 aa15.87■□□□□ 0.13
LRRC28-213ENST00000559399 A0A1B0GVL5 298 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 PDXKO00764 312 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 EPN2O95208 641 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 VNN1O95497 513 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
LRRC28-213ENST00000559399 CYP17A1P05093 508 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 SLC5A3P53794 718 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 DLG4P78352 724 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 ZACNQ401N2 412 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 SMARCD1Q96GM5 515 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 KCNK16Q96T55 309 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 SDCBP2Q9H190 292 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 ARRDC1-AS1Q9H2J1 176 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 HPSEQ9Y251 543 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 TCHHQ07283 1943 aa15.86■□□□□ 0.13
LRRC28-213ENST00000559399 SCAMP3O14828 347 aaKnown RBP15.85■□□□□ 0.13
LRRC28-213ENST00000559399 KIF20AO95235 890 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 ADH1CP00326 375 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 MBL2P11226 248 aaPredicted RBP15.85■□□□□ 0.13
LRRC28-213ENST00000559399 OPRD1P41143 372 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 KRT85P78386 507 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 DHCR24Q15392 516 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 SGSM1Q2NKQ1 1148 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 GAB4Q2WGN9 574 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 AASDHQ4L235 1098 aaPredicted RBP15.85■□□□□ 0.13
LRRC28-213ENST00000559399 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 C12orf50Q8NA57 414 aaPredicted RBP15.85■□□□□ 0.13
LRRC28-213ENST00000559399 TSTD1Q8NFU3 115 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 SCAMP5Q8TAC9 235 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 TMC2Q8TDI7 906 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 TAF4BQ92750 862 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 ELMO3Q96BJ8 720 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 ZC3H10Q96K80 434 aaKnown RBP15.85■□□□□ 0.13
LRRC28-213ENST00000559399 SPATA32Q96LK8 384 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 KRT82Q9NSB4 513 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 EBF1Q9UH73 591 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 PCDHGA5Q9Y5G8 931 aa15.85■□□□□ 0.13
LRRC28-213ENST00000559399 K7EQS6 105 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 COCHO43405 550 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
LRRC28-213ENST00000559399 GDF9O60383 454 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 AP1G2O75843 785 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 EIF2DP41214 584 aaKnown RBP15.84■□□□□ 0.13
LRRC28-213ENST00000559399 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 TUBP50607 506 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 SEC13P55735 322 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 HECTD3Q5T447 861 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 PAQR9Q6ZVX9 377 aa15.84■□□□□ 0.13
LRRC28-213ENST00000559399 SV2AQ7L0J3 742 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms