RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CDK5RAP1Q96SZ6 601 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 KCNK16Q96T55 309 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 HNRNPABQ99729 332 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 TTLL2Q9BWV7 592 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 DUSP16Q9BY84 665 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 B3GNT5Q9BYG0 378 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 OSBPL6Q9BZF3 934 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PLA2G2FQ9BZM2 168 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 SMG9Q9H0W8 520 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 SDCBP2Q9H190 292 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 C8orf33Q9H7E9 229 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 IL21Q9HBE4 155 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 APOBEC3GQ9HC16 384 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 CSNK1G1Q9HCP0 422 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PNPLA8Q9NP80 782 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 TLR8Q9NR97 1041 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 HESX1Q9UBX0 185 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 KIAA1257Q9ULG3 409 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ARHGAP26Q9UNA1 814 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 COQ4Q9Y3A0 265 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PIAS3Q9Y6X2 628 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MTCL1Q9Y4B5 1905 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 SCN1AP35498 2009 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PDCD11Q14690 1871 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 TCHHQ07283 1943 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 MYO10Q9HD67 2058 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 C2orf78A6NCI8 922 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 H0Y858 1186 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 PES1O00541 588 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 SLC9A3R1O14745 358 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 LAMTOR5O43504 91 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 PRAMEF12O95522 483 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 DCNP07585 359 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 PAEPP09466 180 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 MBL2P11226 248 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 RALAP11233 206 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CD19P15391 556 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ACO1P21399 889 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 ATP5C1P36542 298 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 PLA2G5P39877 138 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 MTIF2P46199 727 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 RPS9P46781 194 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 IFNAR2P48551 515 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 VCPP55072 806 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 MFAP3P55082 362 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 USP46P62068 366 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 GCNT1Q02742 428 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 GRSF1Q12849 480 aaKnown RBP eCLIP4.62□□□□□ -1.67
SNX1-205ENST00000559339 LRMPQ12912 555 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ORC1Q13415 861 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 RUNX3Q13761 415 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 LRRC32Q14392 662 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 MTF1Q14872 753 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 PDGFRLQ15198 375 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 STILQ15468 1287 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CCDC142Q17RM4 750 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ITPRIPL2Q3MIP1 535 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SGO2Q562F6 1265 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 HECTD3Q5T447 861 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 PPP1R26Q5T8A7 1209 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 IER5LQ5T953 404 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SNX30Q5VWJ9 437 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CWF19L1Q69YN2 538 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 ZC3H14Q6PJT7 736 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 TMEM270Q6UE05 265 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 GBP6Q6ZN66 633 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 RSRC2Q7L4I2 434 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 ENOSF1Q7L5Y1 443 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 GPIHBP1Q8IV16 184 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 C1orf210Q8IVY1 113 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 TRIM59Q8IWR1 403 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CCDC105Q8IYK2 499 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ARHGAP18Q8N392 663 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CPA6Q8N4T0 437 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 TMEM105Q8N8V8 129 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ANKRD52Q8NB46 1076 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 DTWD2Q8NBA8 298 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ANKRD20A12PQ8NF67 263 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CCDC26Q8TAB7 109 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SCAMP5Q8TAC9 235 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SH3RF2Q8TEC5 729 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 OSCP1Q8WVF1 389 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SEMA4DQ92854 862 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ATOH1Q92858 354 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 USP13Q92995 863 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 TATDN2Q93075 761 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ATP2A3Q93084 1043 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 JAKMIP2Q96AA8 810 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CNOT6LQ96LI5 555 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 CYP2S1Q96SQ9 504 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ARID3AQ99856 593 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 DUSP9Q99956 384 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 IER2Q9BTL4 223 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 DDX23Q9BUQ8 820 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 UBXN6Q9BZV1 441 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 NAT10Q9H0A0 1025 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 EBF3Q9H4W6 596 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 THAP9Q9H5L6 903 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 LRRC4Q9HBW1 653 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 LTB4R2Q9NPC1 389 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms