RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 GJA4P35212 333 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 CACNA2D1P54289 1103 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 IFRD2Q12894 506 aaPredicted RBP18.85■□□□□ 0.61
TPM1-218ENST00000559281 EML3Q32P44 896 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 ACOT1Q86TX2 421 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 FAM35AQ86V20 835 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 LONP2Q86WA8 852 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 DDX42Q86XP3 938 aaKnown RBP eCLIP18.85■□□□□ 0.61
TPM1-218ENST00000559281 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 KCNK16Q96T55 309 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 GTPBP4Q9BZE4 634 aaKnown RBP18.85■□□□□ 0.61
TPM1-218ENST00000559281 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
TPM1-218ENST00000559281 GMEB2Q9UKD1 530 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 VPS13AQ96RL7 3174 aa18.85■□□□□ 0.61
TPM1-218ENST00000559281 LEFTY2O00292 366 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 SLC9A3R1O14745 358 aaPredicted RBP18.84■□□□□ 0.61
TPM1-218ENST00000559281 AP1G2O75843 785 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 GTF2H1P32780 548 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 NDST1P52848 882 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 C1orf220Q5T0J3 134 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 DCLK2Q8N568 766 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 CD101Q93033 1021 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 RNF38Q9H0F5 515 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 LINC00597Q9H2U6 94 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 TMEM30AQ9NV96 361 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 SLC8A2Q9UPR5 921 aa18.84■□□□□ 0.61
TPM1-218ENST00000559281 NUP210Q8TEM1 1887 aaPredicted RBP18.84■□□□□ 0.61
TPM1-218ENST00000559281 COL4A2P08572 1712 aa18.83■□□□□ 0.61
TPM1-218ENST00000559281 CHURC1-FNTBB4DL54 471 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 K7ESF4 209 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 CETN3O15182 167 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 STX10O60499 249 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 SMC2O95347 1197 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 OAS1P00973 400 aaKnown RBP18.83■□□□□ 0.6
TPM1-218ENST00000559281 GCLMP48507 274 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 FNTBP49356 437 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 FOXK2Q01167 660 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 SIM2Q14190 667 aaPredicted RBP18.83■□□□□ 0.6
TPM1-218ENST00000559281 PAQR9Q6ZVX9 377 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 FUKQ8N0W3 1084 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 FMR1NBQ8N0W7 255 aaPredicted RBP18.83■□□□□ 0.6
TPM1-218ENST00000559281 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 GSDMAQ96QA5 445 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 CHORDC1Q9UHD1 332 aaPredicted RBP18.83■□□□□ 0.6
TPM1-218ENST00000559281 CPQQ9Y646 472 aa18.83■□□□□ 0.6
TPM1-218ENST00000559281 CFAP54Q96N23 3096 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 OLFM2O95897 454 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 EGFP01133 1207 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 TRIM49P0CI25 452 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 TRIM49CP0CI26 452 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 EPB41P11171 864 aaKnown RBP18.82■□□□□ 0.6
TPM1-218ENST00000559281 MBL2P11226 248 aaPredicted RBP18.82■□□□□ 0.6
TPM1-218ENST00000559281 ASPAP45381 313 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 SLC5A3P53794 718 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 KRT39Q6A163 491 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 HEATR6Q6AI08 1181 aaKnown RBP18.82■□□□□ 0.6
TPM1-218ENST00000559281 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 PRR23BQ6ZRT6 265 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 TSG101Q99816 390 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 KRT82Q9NSB4 513 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 SMPD4Q9NXE4 827 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 IL37Q9NZH6 218 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 GPR179Q6PRD1 2367 aa18.82■□□□□ 0.6
TPM1-218ENST00000559281 TNFRSF10BO14763 440 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 TUBP50607 506 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 PPP3CAQ08209 521 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 INCA1Q0VD86 236 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 PNOCQ13519 176 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 SNX30Q5VWJ9 437 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 WDR5BQ86VZ2 330 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 ADGRG2Q8IZP9 1017 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 TTC39CQ8N584 583 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 TAS1R2Q8TE23 839 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 FAXDC2Q96IV6 333 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 NIF3L1Q9GZT8 377 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 FBRSL1Q9HCM7 1045 aaKnown RBP18.81■□□□□ 0.6
TPM1-218ENST00000559281 CSNK1G1Q9HCP0 422 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 TBC1D14Q9P2M4 693 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 OTOGLQ3ZCN5 2332 aa18.81■□□□□ 0.6
TPM1-218ENST00000559281 PATJQ8NI35 1801 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 CCDC163A0A0D9SF12 145 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 HRO43593 1189 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 RNF40O75150 1001 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 CCDC130P13994 396 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms