RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 APOPT1Q96IL0 206 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 TRIM55Q9BYV6 548 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ELOVL4Q9GZR5 314 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 TEX264Q9Y6I9 313 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 IQANK1A0A1B0GTG1 560 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 NFKBIEO00221 500 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ENTPD5O75356 428 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 MICAL2O94851 1124 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 GJB1P08034 283 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 CXCL8P10145 99 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 PAX7P23759 505 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 SLC18A2Q05940 514 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 MXD4Q14582 209 aaPredicted RBP17.32■□□□□ 0.36
SPG11-215ENST00000559193 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
SPG11-215ENST00000559193 PTCD3Q96EY7 689 aaKnown RBP17.32■□□□□ 0.36
SPG11-215ENST00000559193 PRR11Q96HE9 360 aaPredicted RBP17.32■□□□□ 0.36
SPG11-215ENST00000559193 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ANKRD27Q96NW4 1050 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 FAM111AQ96PZ2 611 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 RSAD1Q9HA92 442 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 KCNK13Q9HB14 408 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 HEY2Q9UBP5 337 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ANK1P16157 1881 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 IGKV6-21A0A0C4DH24 114 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 E7ENQ6 273 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 HNRNPCL1O60812 293 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 ABL2P42684 1182 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 GABRB2P47870 512 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 ZNF200P98182 395 aaPredicted RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 PRKD1Q15139 912 aaPredicted RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 RAB6CQ53S08 254 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 SH3PXD2AQ5TCZ1 1133 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 SMYD5Q6GMV2 418 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 ZC3H18Q86VM9 953 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 C1orf127Q8N9H9 656 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 NAF1Q96HR8 494 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 CADM1Q9BY67 442 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 RAB6CQ9H0N0 254 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 MGAMO43451 1857 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 RNF8O76064 485 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 ENDOD1O94919 500 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 HAUS5O94927 633 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 NFICP08651 508 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 PYGBP11216 843 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 RFWD3Q6PCD5 774 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 DARS2Q6PI48 645 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 EEPD1Q7L9B9 569 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 SKA1Q96BD8 255 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 C2orf40Q9H1Z8 148 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 CDT1Q9H211 546 aa17.31■□□□□ 0.36
SPG11-215ENST00000559193 RPL26L1Q9UNX3 145 aaKnown RBP17.31■□□□□ 0.36
SPG11-215ENST00000559193 H0Y3Z8 333 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 ACKR2O00590 384 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 AVILO75366 819 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 INHBAP08476 426 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 BGNP21810 368 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPG11-215ENST00000559193 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
SPG11-215ENST00000559193 ANGEL2Q5VTE6 544 aaKnown RBP17.3■□□□□ 0.36
SPG11-215ENST00000559193 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 SH3TC2Q8TF17 1288 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 TTC17Q96AE7 1141 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 TMEM120AQ9BXJ8 343 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 FZD8Q9H461 694 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 FBXO6Q9NRD1 293 aaPredicted RBP17.3■□□□□ 0.36
SPG11-215ENST00000559193 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPG11-215ENST00000559193 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPG11-215ENST00000559193 LRRC42Q9Y546 428 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 CFAP69A5D8W1 941 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 M0QYV0 167 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 CILPO75339 1184 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 C1QAP02745 245 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 ARFIP2P53365 341 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 CDH6P55285 790 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 ACAP1Q15027 740 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
SPG11-215ENST00000559193 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
SPG11-215ENST00000559193 ASNSD1Q9NWL6 643 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 IKBKGQ9Y6K9 419 aa17.3■□□□□ 0.36
SPG11-215ENST00000559193 INO80B-WBP1J3KQ70 363 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 GAS2O43903 313 aaKnown RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 DNAJC6O75061 913 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 SMNDC1O75940 238 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms