RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 SPPL2BQ8TCT7 592 aa12□□□□□ -0.49
CHRNA3-205ENST00000559080 C2orf15Q8WU43 125 aaKnown RBP12□□□□□ -0.49
CHRNA3-205ENST00000559080 CCDC47Q96A33 483 aaKnown RBP12□□□□□ -0.49
CHRNA3-205ENST00000559080 PAGE5Q96GU1 130 aa12□□□□□ -0.49
CHRNA3-205ENST00000559080 FNBP1Q96RU3 617 aa12□□□□□ -0.49
CHRNA3-205ENST00000559080 INTS13Q9NVM9 706 aa12□□□□□ -0.49
CHRNA3-205ENST00000559080 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
CHRNA3-205ENST00000559080 EVLQ9UI08 416 aaPredicted RBP12□□□□□ -0.49
CHRNA3-205ENST00000559080 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
CHRNA3-205ENST00000559080 SHROOM3Q8TF72 1996 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 FAM221BA6H8Z2 402 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 CLIC2O15247 247 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 HNRNPLP14866 589 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 GPR15P49685 360 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 PSMD2Q13200 908 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 ZNF77Q15935 545 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 TAF12Q16514 161 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 KNOP1Q1ED39 458 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 EML3Q32P44 896 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 USP39Q53GS9 565 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 CC2D1AQ6P1N0 951 aaPredicted RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 CYP2U1Q7Z449 544 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 ADGRF2Q8IZF7 708 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 MDGA1Q8NFP4 955 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 TSTD1Q8NFU3 115 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 OLIG1Q8TAK6 271 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 USP33Q8TEY7 942 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 OSCP1Q8WVF1 389 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 FAM84AQ96KN4 292 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 CNOT6LQ96LI5 555 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 SLC22A12Q96S37 553 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 TMEM74BQ9NUR3 256 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 TMLHEQ9NVH6 421 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 GDAP2Q9NXN4 497 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 DDX43Q9NXZ2 648 aaKnown RBP11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 SIX4Q9UIU6 781 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 L1RE1Q9UN81 338 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 HPSEQ9Y251 543 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 MYH10P35580 1976 aa11.99□□□□□ -0.49
CHRNA3-205ENST00000559080 ITPR1Q14643 2758 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 K7EQS6 105 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 KLRC4O43908 158 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 EXOC3O60645 756 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 TNNI1P19237 187 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 PCSK1P29120 753 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 DHPSP49366 369 aaPredicted RBP11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 NDUFA8P51970 172 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 FAM160A1Q05DH4 1040 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 USP4Q13107 963 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 SEMA3BQ13214 749 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 PSMD6Q15008 389 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 NFE2Q16621 373 aaPredicted RBP11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 TRIM61Q5EBN2 209 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 ANO7Q6IWH7 933 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 PIP4P1Q86T03 277 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 C12orf56Q8IXR9 622 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CPA6Q8N4T0 437 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 TOP6BLQ8N6T0 577 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 FSIP1Q8NA03 581 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 OR5B17Q8NGF7 314 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 PIGKQ92643 395 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 MRPS31Q92665 395 aaKnown RBP11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CCDC127Q96BQ5 260 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 HPDLQ96IR7 371 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 CYP2S1Q96SQ9 504 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 DUS2Q9NX74 493 aaKnown RBP11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 PCDHB5Q9Y5E4 795 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 WNT6Q9Y6F9 365 aa11.98□□□□□ -0.49
CHRNA3-205ENST00000559080 IGSF10Q6WRI0 2623 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 SPAARA0A1B0GVQ0 90 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 CLSTN1O94985 981 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 RPN1P04843 607 aaKnown RBP11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 CSH1P0DML2 217 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 CSH2P0DML3 217 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 ENGP17813 658 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 OPRD1P41143 372 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 P2RY2P41231 377 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 LHX1P48742 406 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 LMAN2Q12907 356 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 CRY1Q16526 586 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 INTS6LQ5JSJ4 861 aaKnown RBP11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 SDHAF4Q5VUM1 108 aa11.97□□□□□ -0.49
CHRNA3-205ENST00000559080 PROSER1Q86XN7 944 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms