RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SLC44A4Q53GD3 710 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 SNX30Q5VWJ9 437 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 ARHGAP17Q68EM7 881 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 TRIM68Q6AZZ1 485 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 SCD5Q86SK9 330 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 SUGP1Q8IWZ8 645 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 USP3Q9Y6I4 520 aa13.4□□□□□ -0.26
RABGGTA-207ENST00000558936 KIAA1549LQ6ZVL6 1849 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 O00370 1275 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 TRIM66O15016 1216 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 P4HA2O15460 535 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 FGF19O95750 216 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 TBX18O95935 607 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 PNMA6AP0CW24 399 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 GDI1P31150 447 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 RAB41Q5JT25 222 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 MAML2Q8IZL2 1156 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 TTC8Q8TAM2 541 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 SMARCD1Q96GM5 515 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 FBRSL1Q9HCM7 1045 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 GMIPQ9P107 970 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 HCN4Q9Y3Q4 1203 aa13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
RABGGTA-207ENST00000558936 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 CYP26A1O43174 497 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 STX10O60499 249 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 GNA14O95837 355 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 P4HA1P13674 534 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 ARSAP15289 507 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 AOC1P19801 751 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 KLK7P49862 253 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 KIF11P52732 1056 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 USP4Q13107 963 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 GAS6Q14393 721 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 EZH1Q92800 747 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 TRMT61BQ9BVS5 477 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 DMAP1Q9NPF5 467 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 FANCLQ9NW38 375 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 C2orf42Q9NWW7 574 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
RABGGTA-207ENST00000558936 EPHB6O15197 1021 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 COCHO43405 550 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 ZNF18P17022 549 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 YWHAQP27348 245 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 CLCN5P51795 746 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 GCNT1Q02742 428 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 PDE4CQ08493 712 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 TAF12Q16514 161 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 TMEM270Q6UE05 265 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 UBA3Q8TBC4 463 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 BPIFB1Q8TDL5 484 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 MFSD1Q9H3U5 465 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 TRPV5Q9NQA5 729 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 GKN1Q9NS71 199 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 TDP1Q9NUW8 608 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 OBP2AQ9NY56 170 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
RABGGTA-207ENST00000558936 MDM4O15151 490 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 CHADO15335 359 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 TCF3P15923 654 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms