RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 TRDNQ13061 729 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 GTF2H3Q13889 308 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 FAM83BQ5T0W9 1011 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 CCDC181Q5TID7 509 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 SLFN13Q68D06 897 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 GADL1Q6ZQY3 521 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 Q6ZVL8 140 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 TOX2Q96NM4 488 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 P2RX7Q99572 595 aaKnown RBP6.88□□□□□ -1.31
LRRC28-209ENST00000558861 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
LRRC28-209ENST00000558861 ALDH8A1Q9H2A2 487 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-209ENST00000558861 SH2D4AQ9H788 454 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 MORF4L1Q9UBU8 362 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 MAD2L2Q9UI95 211 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 NR2E1Q9Y466 385 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 PARP14Q460N5 1801 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ZNF536O15090 1300 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 CYTH3O43739 400 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 B4GALT4O60513 344 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 OFD1O75665 1012 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 HSPA1AP0DMV8 641 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 HSPA1BP0DMV9 641 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 HSPA8P11142 646 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 MCCP23508 829 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ECHS1P30084 290 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 TXKP42681 527 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 KIR2DL3P43628 341 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ADCY7P51828 1080 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 RCAN1P53805 252 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ADAM8P78325 824 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 IL10RAQ13651 578 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 GRM4Q14833 912 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ZNF568Q3ZCX4 644 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 APOA5Q6Q788 366 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 BLOC1S2Q6QNY1 142 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 B3GNT9Q6UX72 402 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 USP45Q70EL2 814 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 RUFY3Q7L099 469 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 FAM124AQ86V42 546 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 GRAMD1CQ8IYS0 662 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 LILRA3Q8N6C8 439 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ANKRD53Q8N9V6 530 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 ZNF480Q8WV37 535 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 KAT5Q92993 513 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 LPPQ93052 612 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 RPL10LQ96L21 214 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 PARK7Q99497 189 aaKnown RBP6.87□□□□□ -1.31
LRRC28-209ENST00000558861 MAP3K14Q99558 947 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 UBAC1Q9BSL1 405 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 C22orf23Q9BZE7 217 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 TMOD4Q9NZQ9 345 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 SLC4A7Q9Y6M7 1214 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 MYH4Q9Y623 1939 aa6.87□□□□□ -1.31
LRRC28-209ENST00000558861 BAZ2BQ9UIF8 2168 aaKnown RBP6.86□□□□□ -1.31
LRRC28-209ENST00000558861 GOLGA6CA6NDK9 693 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 GOLGA6BA6NDN3 693 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 MATN2O00339 956 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 VWA5AO00534 786 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 ADCY6O43306 1168 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
LRRC28-209ENST00000558861 CNOT4O95628 575 aaKnown RBP6.86□□□□□ -1.31
LRRC28-209ENST00000558861 GOLGA6DP0CG33 693 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 PSMA5P28066 241 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 SLC1A4P43007 532 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 ST3GAL1Q11201 340 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 NFYCQ13952 458 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 COG2Q14746 738 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 WTAPQ15007 396 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 FAM110CQ1W6H9 321 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 C19orf54Q5BKX5 351 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
LRRC28-209ENST00000558861 KRT40Q6A162 431 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 CFHR4Q92496 578 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 HDAC10Q969S8 669 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 TAAR9Q96RI9 348 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 SLC6A15Q9H2J7 730 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 KAT14Q9H8E8 782 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 SLC38A10Q9HBR0 1119 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 GOLGA6AQ9NYA3 693 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 PCDHA13Q9Y5I0 950 aa6.86□□□□□ -1.31
LRRC28-209ENST00000558861 FRMPD2Q68DX3 1309 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-209ENST00000558861 TMEM232C9JQI7 657 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 DTNBO60941 627 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 FLOT1O75955 427 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 GOLGA8HP0CJ92 632 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 VSIG10L2P0DP72 767 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 MYBP10242 640 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 RXRAP19793 462 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 PDIA3P30101 505 aaKnown RBP6.85□□□□□ -1.31
LRRC28-209ENST00000558861 SLC16A2P36021 539 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms