RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 SPATA2LQ8IUW3 424 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 SECISBP2LQ93073 1101 aaKnown RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 FUBP3Q96I24 572 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 TNIP3Q96KP6 325 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 NAP1L5Q96NT1 182 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 SEPT5Q99719 369 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 LRRC3Q9BY71 257 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 FAM124BQ9H5Z6 455 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 NUMBLQ9Y6R0 609 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 PES1O00541 588 aaKnown RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 SLC30A4O14863 429 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 TEX33O43247 280 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 NOL4O94818 638 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 CALCAP01258 141 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 LRG1P02750 347 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 LAMP2P13473 410 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 CCDC130P13994 396 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 MAGEA11P43364 429 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 MAPRE1Q15691 268 aaKnown RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 KLHDC7AQ5VTJ3 777 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 POTEHQ6S545 545 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 TSSK4Q6SA08 328 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 C4orf50Q6ZRC1 276 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 DNAJB7Q7Z6W7 309 aaPredicted RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 HS6ST3Q8IZP7 471 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 STKLD1Q8NE28 680 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 GIPC2Q8TF65 315 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 RPP25Q9BUL9 199 aaKnown RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
LINC01220-201ENST00000558575 FAM49BQ9NUQ9 324 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 ZSCAN32Q9NX65 697 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 APEX2Q9UBZ4 518 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 SIK3Q9Y2K2 1263 aa16.46■□□□□ 0.23
LINC01220-201ENST00000558575 KANSL1LA0AUZ9 987 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 ALDH1A3P47895 512 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 ZNF132P52740 706 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 GPC5P78333 572 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 SPEM2Q0P670 501 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 ACAP1Q15027 740 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
LINC01220-201ENST00000558575 HNRNPABQ99729 332 aaKnown RBP16.45■□□□□ 0.22
LINC01220-201ENST00000558575 ZSWIM1Q9BR11 485 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
LINC01220-201ENST00000558575 PIDD1Q9HB75 910 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 DNAJC12Q9UKB3 198 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 PCDHB4Q9Y5E5 795 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 SPAG17Q6Q759 2223 aa16.45■□□□□ 0.22
LINC01220-201ENST00000558575 EPHB6O15197 1021 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 XYLBO75191 536 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 MOSPD3O75425 235 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 BEST1O76090 585 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 HMGA1P17096 107 aaKnown RBP16.44■□□□□ 0.22
LINC01220-201ENST00000558575 PTPN2P17706 415 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 CCR2P41597 374 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 EPHB3P54753 998 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 EPHA5P54756 1037 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 UBXN1Q04323 297 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 SYCP1Q15431 976 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 PPP1R26Q5T8A7 1209 aaPredicted RBP16.44■□□□□ 0.22
LINC01220-201ENST00000558575 IQCEQ6IPM2 695 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 VSTM1Q6UX27 236 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 FAM35AQ86V20 835 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 TMC8Q8IU68 726 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 SCN4BQ8IWT1 228 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 ZMIZ2Q8NF64 920 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 ANKRD20A12PQ8NF67 263 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 NETO1Q8TDF5 533 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 TFAP2BQ92481 460 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 JAKMIP2Q96AA8 810 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 KCNK16Q96T55 309 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 SMOQ99835 787 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 CORO1BQ9BR76 489 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 LSM14BQ9BX40 385 aaKnown RBP16.44■□□□□ 0.22
LINC01220-201ENST00000558575 GPR88Q9GZN0 384 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 GANQ9H2C0 597 aa16.44■□□□□ 0.22
LINC01220-201ENST00000558575 ZNF334Q9HCZ1 680 aaPredicted RBP16.44■□□□□ 0.22
LINC01220-201ENST00000558575 COL4A2P08572 1712 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 A0A1B0GTH6 734 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 F8VP50 259 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 FOXN3O00409 490 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 RHOP08100 348 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ADORA2BP29275 332 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 MFAP3P55082 362 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 RPL10AP62906 217 aaKnown RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 FANCCQ00597 558 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 PLD1Q13393 1074 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms