RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 CD58P19256 250 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SLC25A3Q00325 362 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 CNGA3Q16281 694 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 RARS2Q5T160 578 aaKnown RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 LIN9Q5TKA1 542 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 POTEAQ6S8J7 498 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 NAT8LQ8N9F0 302 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FBXO36Q8NEA4 188 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ITPKCQ96DU7 683 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 RILPQ96NA2 401 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 NT5C1BQ96P26 610 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SLITRK1Q96PX8 696 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SRPK1Q96SB4 655 aaKnown RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SMYD3Q9H7B4 428 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 PFDN4Q9NQP4 134 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 JAG2Q9Y219 1238 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 MEI4A8MW99 385 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ADCY3O60266 1144 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 INHBAP08476 426 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 POLR2MP0CAP2 368 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 HOXD12P35452 270 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ECE1P42892 770 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 UBAP2LQ14157 1087 aaKnown RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FNBP1LQ5T0N5 605 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 MON1BQ7L1V2 547 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 RHPN2Q8IUC4 686 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FBXW8Q8N3Y1 598 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ADCY4Q8NFM4 1077 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 VCPIP1Q96JH7 1222 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 HNRNPABQ99729 332 aaKnown RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 WDR83Q9BRX9 315 aaKnown RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FRMD8P1Q9BZ68 369 aaPredicted RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 PLLPQ9Y342 182 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SQORQ9Y6N5 450 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 MYPNQ86TC9 1320 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 BOLA2-SMG1P6H3BVE0 249 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 ITM2AO43736 263 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 BANF1O75531 89 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 SERPINB7O75635 380 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 CYP3A4P08684 503 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 MYL4P12829 197 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 ATP6V1B1P15313 513 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 ZNF23P17027 643 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
PCAT29-201ENST00000558411 NSFP46459 744 aaKnown RBP11.67□□□□□ -0.54
PCAT29-201ENST00000558411 NUP107P57740 925 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 FAAP100Q0VG06 881 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 LRRC38Q5VT99 294 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
PCAT29-201ENST00000558411 KRT39Q6A163 491 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 PPP1R2P3Q6NXS1 205 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 POTEHQ6S545 545 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 ARCQ7LC44 396 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 TXNRD3Q86VQ6 643 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 PDIK1LQ8N165 341 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 CPT1BQ92523 772 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 ACCSQ96QU6 501 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 NACC1Q96RE7 527 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 OSBPL6Q9BZF3 934 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.67□□□□□ -0.54
PCAT29-201ENST00000558411 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 SCINQ9Y6U3 715 aa11.67□□□□□ -0.54
PCAT29-201ENST00000558411 A0A0B4J269 797 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 H3BSA7 217 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 SGK1O00141 431 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCAT29-201ENST00000558411 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
PCAT29-201ENST00000558411 L1CAMP32004 1257 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 HSPA1LP34931 641 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 SLC16A2P36021 539 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 EPHB1P54762 984 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 RELAQ04206 551 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 GABPAQ06546 454 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
PCAT29-201ENST00000558411 TUBB3Q13509 450 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 RALGPS1Q5JS13 557 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 TICAM1Q8IUC6 712 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 SLC15A3Q8IY34 581 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 SEMA4DQ92854 862 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 COX4I2Q96KJ9 171 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
PCAT29-201ENST00000558411 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms