RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 VSNL1P62760 191 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 TANGO2Q6ICL3 276 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ALYREFQ86V81 257 aaKnown RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 METTL23Q86XA0 190 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 TMC8Q8IU68 726 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 RDH13Q8NBN7 331 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 SHKBP1Q8TBC3 707 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 PARD3BQ8TEW8 1205 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 SYN2Q92777 582 aaPredicted RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 SECISBP2LQ93073 1101 aaKnown RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 CCDC42Q96M95 316 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ZSWIM3Q96MP5 696 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ABCB6Q9NP58 842 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 MED4Q9NPJ6 270 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ASAH2Q9NR71 780 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ARHGEF3Q9NR81 526 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ITGA11Q9UKX5 1188 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 MYH10P35580 1976 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 SSU72P8A0A1W2PR75 194 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 H0Y858 1186 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 POLR3GO15318 223 aaPredicted RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 P4HA2O15460 535 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 PJA2O43164 708 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 TACC1O75410 805 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 ECI2O75521 394 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 ATP1A1P05023 1023 aaKnown RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 RHOXF2BP0C7M4 288 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 ALDH1A3P47895 512 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 NUBP1P53384 320 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 EPHB3P54753 998 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 CLDN10P78369 228 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 CYP24A1Q07973 514 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 MAPK8IP2Q13387 824 aaPredicted RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 PLD1Q13393 1074 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 PSMD6Q15008 389 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 TEAD2Q15562 447 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 FAM78AQ5JUQ0 283 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 TCERG1LQ5VWI1 586 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 CCDC70Q6NSX1 233 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 THEM5Q8N1Q8 247 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 NOA1Q8NC60 698 aaKnown RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 FAM71BQ8TC56 605 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 ANKRD36BP1Q96IX9 119 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 SEPT5Q99719 369 aaPredicted RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 RHOXF2Q9BQY4 288 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 TBC1D17Q9HA65 648 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
TPM1-212ENST00000558347 TMLHEQ9NVH6 421 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 FAM86C1Q9NVL1 165 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 TRIM10Q9UDY6 481 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 JRKLQ9Y4A0 524 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 SNX9Q9Y5X1 595 aa10.93□□□□□ -0.66
TPM1-212ENST00000558347 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 STK25O00506 426 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 HCRTO43612 131 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 ATF6P18850 670 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 GTF2H1P32780 548 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 FMO5P49326 533 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 RBP5P82980 135 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 CASP8Q14790 479 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 SURF1Q15526 300 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 CCDC142Q17RM4 750 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 MGAT5BQ3V5L5 792 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 DCAF17Q5H9S7 520 aaPredicted RBP10.92□□□□□ -0.66
TPM1-212ENST00000558347 C1orf220Q5T0J3 134 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 STXBP5Q5T5C0 1151 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 DNAJB7Q7Z6W7 309 aaPredicted RBP10.92□□□□□ -0.66
TPM1-212ENST00000558347 OSTM1Q86WC4 334 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 WDR49Q8IV35 697 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 LEMD2Q8NC56 503 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 PLEKHO2Q8TD55 490 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 PSMG2Q969U7 264 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 ELSPBP1Q96BH3 223 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 ASB16Q96NS5 453 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 GDAP2Q9NXN4 497 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 DDX43Q9NXZ2 648 aaKnown RBP10.92□□□□□ -0.66
TPM1-212ENST00000558347 HSFX1Q9UBD0 423 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 NCANO14594 1321 aa10.92□□□□□ -0.66
TPM1-212ENST00000558347 COL4A2P08572 1712 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 H3BQF6 201 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 HUS1O60921 280 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 TNNC2P02585 160 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 DLATP10515 647 aaKnown RBP10.91□□□□□ -0.66
TPM1-212ENST00000558347 TCP1P17987 556 aaKnown RBP10.91□□□□□ -0.66
TPM1-212ENST00000558347 RFX1P22670 979 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 ACAT1P24752 427 aaKnown RBP10.91□□□□□ -0.66
TPM1-212ENST00000558347 KLK7P49862 253 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 KIF11P52732 1056 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 STARD6P59095 220 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 GRM2Q14416 872 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 MLF2Q15773 248 aaPredicted RBP10.91□□□□□ -0.66
TPM1-212ENST00000558347 DUOXA2Q1HG44 320 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 SLC44A4Q53GD3 710 aa10.91□□□□□ -0.66
TPM1-212ENST00000558347 GBP6Q6ZN66 633 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms