RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 MED7O43513 233 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 BEST1O76090 585 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 GFPT2O94808 682 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 PTPN2P17706 415 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 SOX5P35711 763 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 PBX1P40424 430 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 STAT1P42224 750 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 MTHFRP42898 656 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 JAM2P57087 298 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 BPIFB4P59827 614 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 STILQ15468 1287 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
RCCD1-209ENST00000557750 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 CLEC20AQ6ZU45 233 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 SLC47A2Q86VL8 602 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 SMOQ99835 787 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 ZSWIM1Q9BR11 485 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 DUSP16Q9BY84 665 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
RCCD1-209ENST00000557750 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
RCCD1-209ENST00000557750 PRR23AA6NEV1 266 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 SLC38A8A6NNN8 435 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 M0QYV0 167 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 AP5Z1O43299 807 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 PAPLNO95428 1278 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 RHOP08100 348 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CSH1P0DML2 217 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CSH2P0DML3 217 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 NBL1P41271 181 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 BCAT1P54687 386 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 NTHL1P78549 312 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 IFRD2Q12894 506 aaPredicted RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CNGA2Q16280 664 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 LCLAT1Q6UWP7 414 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 DENND5BQ6ZUT9 1274 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 ZMIZ2Q8NF64 920 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 UBA3Q8TBC4 463 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 SPATA17Q96L03 361 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 MICAL2O94851 1124 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 MYL4P12829 197 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CYP11B1P15538 503 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 PDE6CP51160 858 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 ARID5AQ03989 594 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 BST2Q10589 180 aaKnown RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 FIGNQ5HY92 759 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 SPECC1LQ69YQ0 1117 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 TDRD5Q8NAT2 981 aaKnown RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 CEP295NLQ96MC4 621 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 PPP1R9BQ96SB3 815 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 TTYH3Q9C0H2 523 aa12.93□□□□□ -0.34
RCCD1-209ENST00000557750 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
RCCD1-209ENST00000557750 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.93□□□□□ -0.345e-7■□□□□ 10.6
RCCD1-209ENST00000557750 GVINP1Q7Z2Y8 2422 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 CLUHO75153 1309 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 ITIH6Q6UXX5 1313 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 KRT9P35527 623 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 SLC5A3P53794 718 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 FOXK2Q01167 660 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 PDE4CQ08493 712 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 GET4Q7L5D6 327 aaPredicted RBP12.92□□□□□ -0.34
RCCD1-209ENST00000557750 VSTM4Q8IW00 320 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 LEMD2Q8NC56 503 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 BAP1Q92560 729 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
RCCD1-209ENST00000557750 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
RCCD1-209ENST00000557750 MRPS23Q9Y3D9 190 aaKnown RBP12.92□□□□□ -0.34
RCCD1-209ENST00000557750 ZNF197O14709 1029 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 CCDC172P0C7W6 258 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 SETSIPP0DME0 302 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 HMGA1P17096 107 aaKnown RBP12.91□□□□□ -0.34
RCCD1-209ENST00000557750 FSHRP23945 695 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 GABRR2P28476 465 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 CLCN5P51795 746 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 USP46P62068 366 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 PIGZQ86VD9 579 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 ZSCAN30Q86W11 494 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
RCCD1-209ENST00000557750 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
RCCD1-209ENST00000557750 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms