RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 STXBP5Q5T5C0 1151 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 PIGZQ86VD9 579 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 SCAMP5Q8TAC9 235 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 ZNF606Q8WXB4 792 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 SECISBP2LQ93073 1101 aaKnown RBP15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 ACSF2Q96CM8 615 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 SPAG5Q96R06 1193 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 ATXN3LQ9H3M9 355 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 IL37Q9NZH6 218 aa15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 SPTBN5Q9NRC6 3674 aaKnown RBP15.69■□□□□ 0.1
VIPAS39-210ENST00000557466 XIRP2A4UGR9 3374 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 XPO1O14980 1071 aaKnown RBP15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 MED7O43513 233 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 GFPT2O94808 682 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 LAMP2P13473 410 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 YWHAQP27348 245 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 SOX5P35711 763 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 DENND1BQ6P3S1 775 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 CACNA2D4Q7Z3S7 1137 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 FBXO32Q969P5 355 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 MCRS1Q96EZ8 462 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 TTYH3Q9C0H2 523 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 CD320Q9NPF0 282 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 EHD2Q9NZN4 543 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 EPS15L1Q9UBC2 864 aa15.68■□□□□ 0.1
VIPAS39-210ENST00000557466 CUL9Q8IWT3 2517 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 FAM92AA1XBS5 289 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 AP5Z1O43299 807 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 CYP11B1P15538 503 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 STAT1P42224 750 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 PLA2G4AP47712 749 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 SLC8A3P57103 927 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 TAF10Q12962 218 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 MEA1Q16626 185 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 ARHGAP15Q53QZ3 475 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 GPR158Q5T848 1215 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 EPS8L1Q8TE68 723 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 BAP1Q92560 729 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 ZSWIM3Q96MP5 696 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 UHRF1Q96T88 793 aaPredicted RBP15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 UBXN6Q9BZV1 441 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 COMMD8Q9NX08 183 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 GMIPQ9P107 970 aa15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 ZFP37Q9Y6Q3 630 aaPredicted RBP15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 KIF26AQ9ULI4 1882 aaPredicted RBP15.67■□□□□ 0.1
VIPAS39-210ENST00000557466 CBFA2T2O43439 604 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 TPM3P06753 285 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 RGS7P49802 495 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 PDE6CP51160 858 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 KIF11P52732 1056 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 BPIFB4P59827 614 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 RAB41Q5JT25 222 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 SARM1Q6SZW1 724 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 NOP9Q86U38 636 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 PASD1Q8IV76 773 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 GJD3Q8N144 294 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 ST13P5Q8NFI4 369 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 SLC35F5Q8WV83 523 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 MRPS31Q92665 395 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 SLITRK1Q96PX8 696 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 FBXO44Q9H4M3 255 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 SLITRK6Q9H5Y7 841 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 GDE1Q9NZC3 331 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 PCDHGC3Q9UN70 934 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 NCANO14594 1321 aa15.66■□□□□ 0.1
VIPAS39-210ENST00000557466 MYO10Q9HD67 2058 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 GABBR2O75899 941 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 GPD2P43304 727 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TKTL1P51854 596 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 ADIGQ0VDE8 80 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 HTR4Q13639 388 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 FAM78AQ5JUQ0 283 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TAF3Q5VWG9 929 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TXNDC8Q6A555 127 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 PMF1Q6P1K2 205 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 MAB21L3Q8N8X9 362 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 PDZD8Q8NEN9 1154 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 ZSCAN18Q8TBC5 510 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 SLC20A1Q8WUM9 679 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 KCTD13Q8WZ19 329 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 OVCA2Q8WZ82 227 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 DDX1Q92499 740 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 ASB16Q96NS5 453 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TASP1Q9H6P5 420 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 LRRC4Q9HBW1 653 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TRPC7Q9HCX4 862 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 TRPM5Q9NZQ8 1165 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 LIMD1Q9UGP4 676 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 CYTH4Q9UIA0 394 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 NOCTQ9UK39 431 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 SCML2Q9UQR0 700 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 USP3Q9Y6I4 520 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 ITIH6Q6UXX5 1313 aa15.65■□□□□ 0.1
VIPAS39-210ENST00000557466 VCANP13611 3396 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms