RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PNPLA8Q9NP80 782 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 HESX1Q9UBX0 185 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 HMGXB4Q9UGU5 601 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 KIAA1257Q9ULG3 409 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 PIAS3Q9Y6X2 628 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 F5P12259 2224 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MIA3Q5JRA6 1907 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MUC6Q6W4X9 2439 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 ZNF840PA6NDX5 716 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 FAM170BA6NMN3 283 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 NRG2O14511 850 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 PRAMEF12O95522 483 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 TPM2P07951 284 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 CD19P15391 556 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 LRMPQ12912 555 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 KLHL40Q2TBA0 621 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 ITPRIPL2Q3MIP1 535 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 HECTD3Q5T447 861 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 SASS6Q6UVJ0 657 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 TADA2BQ86TJ2 420 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 TRIM59Q8IWR1 403 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 ARL14EPQ8N8R7 260 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 DTWD2Q8NBA8 298 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 USP13Q92995 863 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 TATDN2Q93075 761 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 CNOT6LQ96LI5 555 aaKnown RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 KCNK16Q96T55 309 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 SMG9Q9H0W8 520 aaKnown RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 CSNK1G1Q9HCP0 422 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 LTB4R2Q9NPC1 389 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 TLR8Q9NR97 1041 aaKnown RBP14.61□□□□□ -0.07
VPS33B-206ENST00000557358 RAPGEFL1Q9UHV5 662 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 ARHGAP26Q9UNA1 814 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 NCANO14594 1321 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 OBSL1O75147 1896 aa14.61□□□□□ -0.07
VPS33B-206ENST00000557358 SLC9A3R1O14745 358 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-206ENST00000557358 MBL2P11226 248 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-206ENST00000557358 USP46P62068 366 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 GOLGA8FQ08AF8 430 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 GOLGA8DPQ0D2H9 430 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 LRRC32Q14392 662 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 MTF1Q14872 753 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 SGO2Q562F6 1265 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 POTEHQ6S545 545 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 PAQR9Q6ZVX9 377 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 RALGPS2Q86X27 583 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-206ENST00000557358 CCDC105Q8IYK2 499 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 ATP2A3Q93084 1043 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 TWNKQ96RR1 684 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 DDX23Q9BUQ8 820 aaKnown RBP14.6□□□□□ -0.07
VPS33B-206ENST00000557358 DUSP16Q9BY84 665 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 FOXQ1Q9C009 403 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 THAP9Q9H5L6 903 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 GKN1Q9NS71 199 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 DUS2Q9NX74 493 aaKnown RBP14.6□□□□□ -0.07
VPS33B-206ENST00000557358 PCDHB4Q9Y5E5 795 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 KMT2EQ8IZD2 1858 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 ANAPC1Q9H1A4 1944 aa14.6□□□□□ -0.07
VPS33B-206ENST00000557358 TICRRQ7Z2Z1 1910 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 C2orf78A6NCI8 922 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 TADA3O75528 432 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 DCNP07585 359 aaKnown RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 VDRP11473 427 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 ACO1P21399 889 aaKnown RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 PLA2G5P39877 138 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 PSEN1P49768 467 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 TUBP50607 506 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 CACNA2D1P54289 1103 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 PPP2R5DQ14738 602 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 STILQ15468 1287 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 PPP1R26Q5T8A7 1209 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 IER5LQ5T953 404 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 TMEM270Q6UE05 265 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 GBP6Q6ZN66 633 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 ARHGAP18Q8N392 663 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 KIAA1958Q8N8K9 716 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 EHBP1Q8NDI1 1231 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 SCAMP5Q8TAC9 235 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 ATOH1Q92858 354 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 JAKMIP2Q96AA8 810 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 CDK5RAP1Q96SZ6 601 aaKnown RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 SMOQ99835 787 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 ARID3AQ99856 593 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 IER2Q9BTL4 223 aa14.59□□□□□ -0.07
VPS33B-206ENST00000557358 NDRG2Q9UN36 371 aaKnown RBP14.59□□□□□ -0.07
VPS33B-206ENST00000557358 PES1O00541 588 aaKnown RBP14.58□□□□□ -0.08
VPS33B-206ENST00000557358 TNFRSF10BO14763 440 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 PI15O43692 258 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 LRRN2O75325 713 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 NFATC1O95644 943 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 PAEPP09466 180 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 RALAP11233 206 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 TCF3P15923 654 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 BCAT1P54687 386 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 RAD23BP54727 409 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 MFAP3P55082 362 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SLC7A9P82251 487 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms