RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 SDHAF4Q5VUM1 108 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 TDRD10Q5VZ19 366 aaKnown RBP10.91□□□□□ -0.66
RDH11-210ENST00000557331 SDE2Q6IQ49 451 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 LIMS2Q7Z4I7 341 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 TTC30AQ86WT1 665 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 SYCP3Q8IZU3 236 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 PGBD3Q8N328 593 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 CCDC33Q8N5R6 958 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 ALLCQ8N6M5 410 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 TXNDC5Q8NBS9 432 aaKnown RBP10.91□□□□□ -0.66
RDH11-210ENST00000557331 MYCBPAPQ8TBZ2 947 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 LRRC15Q8TF66 581 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 C8orf48Q96LL4 319 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 FNBP1Q96RU3 617 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 FAM213AQ9BRX8 229 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 STRA6Q9BX79 667 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 ZDHHC5Q9C0B5 715 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 KIAA1586Q9HCI6 787 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 ARHGEF4Q9NR80 690 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 RBAKQ9NYW8 714 aaPredicted RBP10.91□□□□□ -0.66
RDH11-210ENST00000557331 CIZ1Q9ULV3 898 aaPredicted RBP10.91□□□□□ -0.66
RDH11-210ENST00000557331 INVSQ9Y283 1065 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
RDH11-210ENST00000557331 OBSL1O75147 1896 aa10.91□□□□□ -0.66
RDH11-210ENST00000557331 ASXL3Q9C0F0 2248 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ANAPC1Q9H1A4 1944 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 APC2O95996 2303 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 TBC1D3BA6NDS4 549 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 HYAL3O43820 417 aaPredicted RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 TNNC2P02585 160 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 CYP17A1P05093 508 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 CFIP05156 583 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 NEFLP07196 543 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ADH5P11766 374 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 GNSP15586 552 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ACAT1P24752 427 aaKnown RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 TXLNAP40222 546 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 KIR2DL1P43626 348 aaPredicted RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 RPL6Q02878 288 aaKnown RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 SOWAHAQ2M3V2 549 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ZC2HC1CQ53FD0 456 aaPredicted RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 NAIF1Q69YI7 327 aaPredicted RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 SV2BQ7L1I2 683 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 BRAPQ7Z569 592 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 PROSER1Q86XN7 944 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 TMEFF1Q8IYR6 380 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 HMGB4Q8WW32 186 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 FOXJ1Q92949 421 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 HPDLQ96IR7 371 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 SYT15Q9BQS2 421 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 CAPN10Q9HC96 672 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 DNAAF2Q9NVR5 837 aaKnown RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 DEC1Q9P2X7 70 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
RDH11-210ENST00000557331 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
RDH11-210ENST00000557331 PLXND1Q9Y4D7 1925 aa10.9□□□□□ -0.67
RDH11-210ENST00000557331 TCRBV21S2A2A0A5A6 115 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 ZNF233A6NK53 670 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 SGK1O00141 431 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 TAF4O00268 1085 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 TACC1O75410 805 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 OAS1P00973 400 aaKnown RBP10.89□□□□□ -0.67
RDH11-210ENST00000557331 SPINK2P20155 84 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 WARSP23381 471 aaKnown RBP10.89□□□□□ -0.67
RDH11-210ENST00000557331 BDNFP23560 247 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 TIE1P35590 1138 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 PTGER3P43115 390 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 TUBP50607 506 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 ZNF132P52740 706 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 ZNF33AQ06730 810 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 WDR45BQ5MNZ6 344 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 RHBDF2Q6PJF5 856 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 RAB44Q7Z6P3 723 aaPredicted RBP10.89□□□□□ -0.67
RDH11-210ENST00000557331 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 TMEM74BQ9NUR3 256 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 INTS13Q9NVM9 706 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 COMMD8Q9NX08 183 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
RDH11-210ENST00000557331 CPQQ9Y646 472 aa10.89□□□□□ -0.67
RDH11-210ENST00000557331 URB1O60287 2271 aaKnown RBP10.89□□□□□ -0.67
RDH11-210ENST00000557331 SMG1Q96Q15 3661 aaKnown RBP10.88□□□□□ -0.67
RDH11-210ENST00000557331 ATP8B3O60423 1300 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 NPC1O15118 1278 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 HOXC11O43248 304 aaPredicted RBP10.88□□□□□ -0.67
RDH11-210ENST00000557331 GCNT3O95395 438 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 ITPKAP23677 461 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 YWHAQP27348 245 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 NTSR1P30989 418 aa10.88□□□□□ -0.67
RDH11-210ENST00000557331 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms