RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
APEX1-216ENST00000557159 ATG16L1Q676U5 607 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 NAT8LQ8N9F0 302 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 GLIS1Q8NBF1 620 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 LENG1Q96BZ8 264 aaPredicted RBP13.11□□□□□ -0.31
APEX1-216ENST00000557159 PRR11Q96HE9 360 aaPredicted RBP13.11□□□□□ -0.31
APEX1-216ENST00000557159 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 PLEKHG4BQ96PX9 1271 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 LXNQ9BS40 222 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
APEX1-216ENST00000557159 TRPM7Q96QT4 1865 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 H3BRJ5 948 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 CPA3P15088 417 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 BTKQ06187 659 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 TFDP1Q14186 410 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 KLC3Q6P597 504 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 GFM2Q969S9 779 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 DDX50Q9BQ39 737 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
APEX1-216ENST00000557159 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.1□□□□□ -0.31
APEX1-216ENST00000557159 MYH9P35579 1960 aaKnown RBP13.09□□□□□ -0.31
APEX1-216ENST00000557159 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 I3L4J1 428 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ITGA2BP08514 1039 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SULT2A1Q06520 285 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 VGLL4Q14135 290 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 NOL9Q5SY16 702 aaKnown RBP13.09□□□□□ -0.31
APEX1-216ENST00000557159 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SENP7Q9BQF6 1050 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TIMMDC1Q9NPL8 285 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 PARVAQ9NVD7 372 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 PCNTO95613 3336 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 FAM170AA1A519 330 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 CPOXP36551 454 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 CHN2P52757 468 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 NOMO3P69849 1222 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
APEX1-216ENST00000557159 CREB5Q02930 508 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ANKRD20A4Q4UJ75 823 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TFDP3Q5H9I0 405 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 C1orf146Q5VVC0 180 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 TAS1R2Q8TE23 839 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 MAF1Q9H063 256 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 PREBQ9HCU5 417 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 PPM1HQ9ULR3 514 aa13.09□□□□□ -0.31
APEX1-216ENST00000557159 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 A0A088AWK7 358 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 TISP43B9A030 160 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
APEX1-216ENST00000557159 P4HBP07237 508 aaKnown RBP13.08□□□□□ -0.32
APEX1-216ENST00000557159 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 ZSCAN5DPP0CG00 497 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 HARSP12081 509 aaKnown RBP13.08□□□□□ -0.32
APEX1-216ENST00000557159 VCLP18206 1134 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 CD58P19256 250 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 BGNP21810 368 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 SSTR1P30872 391 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 CCNFP41002 786 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
APEX1-216ENST00000557159 CLDN10P78369 228 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
APEX1-216ENST00000557159 HSP90AA5PQ58FG0 334 aa13.08□□□□□ -0.32
APEX1-216ENST00000557159 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms