RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 SLKQ9H2G2 1235 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GOLGA2P5Q9HBQ8 144 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ENAMQ9NRM1 1142 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 RBM28Q9NW13 759 aaKnown RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GMIPQ9P107 970 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 CYP8B1Q9UNU6 501 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 BTBD3Q9Y2F9 522 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 WNT6Q9Y6F9 365 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 DOCK6Q96HP0 2047 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 DOPEY2Q9Y3R5 2298 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 SHROOM3Q8TF72 1996 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 DOCK5Q9H7D0 1870 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 MTCL1Q9Y4B5 1905 aaKnown RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 NID2Q14112 1375 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 COL4A2P08572 1712 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 E2F8A0AVK6 867 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 BLACEA4D250 179 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CLEC18AA5D8T8 446 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 TBC1D3BA6NDS4 549 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ENC1O14682 589 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CYP21A2P08686 494 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 POU3F2P20265 443 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CD6P30203 668 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ARL2P36404 184 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 KIR2DL1P43626 348 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ANTXR2P58335 489 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 SMARCB1Q12824 385 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ILKQ13418 452 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 NOLC1Q14978 699 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 MGAT5BQ3V5L5 792 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 Q4G0T1 1027 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 EMC10Q5UCC4 262 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 KIAA1614Q5VZ46 1190 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 TXNDC8Q6A555 127 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CLEC18BQ6UXF7 455 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CCDC81Q6ZN84 652 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ZCCHC9Q8N567 271 aaKnown RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 EXD3Q8N9H8 876 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CLEC18CQ8NCF0 446 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 IGSF8Q969P0 613 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 YTHDC1Q96MU7 727 aaKnown RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 NACC1Q96RE7 527 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 UCN2Q96RP3 112 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 SEMA3CQ99985 751 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CCDC94Q9BW85 323 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ZMYND12Q9H0C1 365 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 C2orf40Q9H1Z8 148 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CXCL16Q9H2A7 254 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 LINC00597Q9H2U6 94 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 FZD8Q9H461 694 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 PDZD7Q9H5P4 517 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ZSWIM4Q9H7M6 989 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 TTC12Q9H892 705 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 CLCA2Q9UQC9 943 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 NOTCH4Q99466 2003 aa6.23□□□□□ -1.41
ATXN3-245ENST00000556958 ATMQ13315 3056 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 FLNCQ14315 2725 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 A0A1B0GVT2 93 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 MTMR11A4FU01 709 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 LRRIQ4A6NIV6 560 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 METTL12A8MUP2 240 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 LAD1O00515 517 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 ACKR2O00590 384 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 SLC9A3R1O14745 358 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 PRC1O43663 620 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 VNN2O95498 520 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 F11P03951 625 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 OR4Q2P0C623 313 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 NCAM1P13591 858 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 HOXB2P14652 356 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 GLRA2P23416 452 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 NTSR1P30989 418 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 MCM5P33992 734 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 CSNK1EP49674 416 aaKnown RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 NLRP12P59046 1061 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 ZNF77Q15935 545 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 INF2Q27J81 1249 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 FBXL19Q6PCT2 694 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 KIAA1958Q8N8K9 716 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 ASAP3Q8TDY4 903 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 GJA10Q969M2 543 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 CNDP2Q96KP4 475 aaKnown RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 CCDC43Q96MW1 224 aaKnown RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 KCTD15Q96SI1 283 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 MMS19Q96T76 1030 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 XPNPEP1Q9NQW7 623 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 THSD1Q9NS62 852 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 UXTQ9UBK9 157 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 PLEKHB1Q9UF11 243 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms