RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 PROB1E7EW31 1015 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 ADAMTS3O15072 1205 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 PRKCBP05771 671 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 CERS1P27544 350 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 MLC1Q15049 377 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 NXNQ6DKJ4 435 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 SLC18B1Q6NT16 456 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 CATSPERGQ6ZRH7 1159 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 NEK8Q86SG6 692 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 SPARTQ8N0X7 666 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 MAGEB6Q8N7X4 407 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 SCARB1Q8WTV0 552 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 JDP2Q8WYK2 163 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 RITA1Q96K30 269 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 C5orf34Q96MH7 638 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 ASB2Q96Q27 587 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 CDY1Q9Y6F8 540 aa4.84□□□□□ -1.63
SLC38A6-220ENST00000556938 SETD1BQ9UPS6 1966 aaKnown RBP4.84□□□□□ -1.64
SLC38A6-220ENST00000556938 PYCARD-AS1I3L0S3 204 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 TP73O15350 636 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 MARCH6O60337 910 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 TUBB4AP04350 444 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 BRAFP15056 766 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 ALDH5A1P51649 535 aaPredicted RBP4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 PSG6Q00889 435 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 KLF9Q13886 244 aaPredicted RBP4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 CCNIQ14094 377 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 CERCAMQ5T4B2 595 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 MTHFD1LQ6UB35 978 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 SPSB4Q96A44 273 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 SNX18Q96RF0 628 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 XPNPEP3Q9NQH7 507 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 DNMT3BQ9UBC3 853 aaKnown RBP4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 TPCN1Q9ULQ1 816 aa4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 G3BP2Q9UN86 482 aaKnown RBP4.83□□□□□ -1.64
SLC38A6-220ENST00000556938 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 H7C1Q1 480 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 H7C4K7 107 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 FRS3O43559 492 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 RASAL1O95294 804 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 ZKSCAN1P17029 563 aaPredicted RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 SFPQP23246 707 aaKnown RBP eCLIP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 GKP32189 559 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 RENBPP51606 427 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 BCAT1P54687 386 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 CNGA2Q16280 664 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 CACHD1Q5VU97 1274 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 SLC2A7Q6PXP3 512 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 NMD3Q96D46 503 aaKnown RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 RSPRY1Q96DX4 576 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 ZBTB45Q96K62 511 aaPredicted RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 STK31Q9BXU1 1019 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 FAM204AQ9H8W3 233 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 PDGFCQ9NRA1 345 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 LPAR3Q9UBY5 353 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 AMFRQ9UKV5 643 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 DRG1Q9Y295 367 aaKnown RBP4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 BTBD3Q9Y2F9 522 aa4.82□□□□□ -1.64
SLC38A6-220ENST00000556938 SHROOM4Q9ULL8 1493 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 FNDC1Q4ZHG4 1894 aaPredicted RBP4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 LOC102723971A0A1B0GUV8 181 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 SMIM35A0A1B0GVV1 85 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 TCRBV5S1A1TA0A578 114 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 ISM1B1AKI9 464 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 POC1B-GALNT4F8VUJ3 575 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 CES2O00748 559 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 TSPAN6O43657 245 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 PMPCBO75439 489 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 RASSF9O75901 435 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 MYCLP12524 364 aaPredicted RBP4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 PRKAR1BP31321 381 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 UQCRC1P31930 480 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 ITGA8P53708 1063 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 FMO1Q01740 532 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 NPY5RQ15761 445 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 ETFDHQ16134 617 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 INSCQ1MX18 579 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 RNF220Q5VTB9 566 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 C11orf87Q6NUJ2 197 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 SERPINA13PQ6UXR4 307 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 GALNT4Q8N4A0 578 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 FAM156AQ8NDB6 213 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 LRTOMTQ8WZ04 291 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 MMS19Q96T76 1030 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 TRIM5Q9C035 493 aa4.81□□□□□ -1.64
SLC38A6-220ENST00000556938 BHMT2Q9H2M3 363 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms