RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 H0Y626 953 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 TRIM66O15016 1216 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 TRIM16O95361 564 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 OLFM2O95897 454 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 ADH1CP00326 375 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 LMO2P25791 158 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 GJB2P29033 226 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 TNFRSF4P43489 277 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 KIR2DL1P43626 348 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 ATXN3P54252 364 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 USP46P62068 366 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 NOP14P78316 857 aaKnown RBP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 RESTQ13127 1097 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 RHBDF2Q6PJF5 856 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 ARMCX6Q7L4S7 300 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 PGBD3Q8N328 593 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 HDDC3Q8N4P3 179 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 FRMD1Q8N878 549 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 CEP76Q8TAP6 659 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 KBTBD7Q8WVZ9 684 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 ANKRD36BP1Q96IX9 119 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-221ENST00000556571 PILRBQ9UKJ0 227 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 SLC6A14Q9UN76 642 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 CPQQ9Y646 472 aa12.69□□□□□ -0.38
ACTN1-221ENST00000556571 PI4KAP42356 2102 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 SPAARA0A1B0GVQ0 90 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 GOLGA8IPA6NC78 632 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 AP5Z1O43299 807 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 GCNT3O95395 438 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 CFIP05156 583 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 GFPT1Q06210 699 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 RING1Q06587 406 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 MESP2Q0VG99 397 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 ALCAMQ13740 583 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-221ENST00000556571 SV2BQ7L1I2 683 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 RABEPKQ7Z6M1 372 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 SFTPA1Q8IWL2 248 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 MYCBPAPQ8TBZ2 947 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 DNAJC19Q96DA6 116 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 EPSTI1Q96J88 318 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 OLFML3Q9NRN5 406 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 INTS13Q9NVM9 706 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 KLK13Q9UKR3 277 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
ACTN1-221ENST00000556571 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 FAM221BA6H8Z2 402 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 F8VP50 259 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 ADAM23O75077 832 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 ABL1P00519 1130 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 OAS1P00973 400 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 TNNC2P02585 160 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 SERPINF2P08697 491 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 ADH5P11766 374 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 ITPKAP23677 461 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 RABEP1Q15276 862 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 SURF1Q15526 300 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 PREPLQ4J6C6 727 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 SLC36A4Q6YBV0 504 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 TRMT11Q7Z4G4 463 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 C12orf40Q86WS4 652 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms