RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 RTL10Q7L3V2 364 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 SLC30A5Q8TAD4 765 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 ZNF707Q96C28 371 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 NHEJ1Q9H9Q4 299 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 CLDND1Q9NY35 253 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 TAS2R14Q9NYV8 317 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 ADAMTS1Q9UHI8 967 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 CCDC195A0A1B0GUA6 201 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 SPDYE4A6NLX3 237 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 PIK3R2O00459 728 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 TBX10O75333 385 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 HNRNPA1P09651 372 aaKnown RBP eCLIP18.36■□□□□ 0.53
TUBB3-211ENST00000556536 HOXA9P31269 272 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 LTBRP36941 435 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 SLC5A3P53794 718 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 EPHB3P54753 998 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 PLD1Q13393 1074 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 SYCE2Q6PIF2 218 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 ELMSAN1Q6PJG2 1045 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 DNAAF5Q86Y56 855 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 TMEM139Q8IV31 216 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 SCAMP5Q8TAC9 235 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 STK32AQ8WU08 396 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 CPXM1Q96SM3 734 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 APOL5Q9BWW9 433 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 SLC4A5Q9BY07 1137 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 ZDHHC7Q9NXF8 308 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 TJP2Q9UDY2 1190 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 CEP83Q9Y592 693 aa18.36■□□□□ 0.53
TUBB3-211ENST00000556536 A0A087X0T9 212 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 NCK2O43639 380 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 FAM228BP0C875 321 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 HMGA1P17096 107 aaKnown RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 RPL34P49207 117 aaKnown RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 VEPH1Q14D04 833 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 PTPN20Q4JDL3 420 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 RAB41Q5JT25 222 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 TMEM31Q5JXX7 168 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 RARS2Q5T160 578 aaKnown RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 TMC5Q6UXY8 1006 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 EP400NLQ6ZTU2 488 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 DENND5BQ6ZUT9 1274 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 DNAJB7Q7Z6W7 309 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 NUP93Q8N1F7 819 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 KCTD13Q8WZ19 329 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 PSMG2Q969U7 264 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 PPP1R13BQ96KQ4 1090 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 BAG1Q99933 345 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-211ENST00000556536 PRKD2Q9BZL6 878 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 EPHX3Q9H6B9 360 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 SFXN1Q9H9B4 322 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 ST7Q9NRC1 585 aa18.35■□□□□ 0.53
TUBB3-211ENST00000556536 SOWAHDA6NJG2 315 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 TMCO5BA8MYB1 307 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 E5RJQ4 531 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 PAPLNO95428 1278 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 LCP1P13796 627 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 TKTL1P51854 596 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 KIF11P52732 1056 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 CENPCQ03188 943 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ADIGQ0VDE8 80 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 IFRD2Q12894 506 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 C2CD6Q53TS8 623 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ACAD10Q6JQN1 1059 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 VPS36Q86VN1 386 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 HS6ST3Q8IZP7 471 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 CMASQ8NFW8 434 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 HSFY1Q96LI6 401 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 CCDC42Q96M95 316 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ZNF512Q96ME7 567 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ZNF334Q9HCZ1 680 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 HCFC1R1Q9NWW0 138 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 IL37Q9NZH6 218 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 NENFQ9UMX5 172 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ASB3Q9Y575 518 aa18.34■□□□□ 0.53
TUBB3-211ENST00000556536 ERBB2P04626 1255 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 POU2F2P09086 479 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 CSH1P0DML2 217 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 CSH2P0DML3 217 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 MMP8P22894 467 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 NTHL1P78549 312 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 PTP4A2Q12974 167 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 MTF1Q14872 753 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 RAD9BQ6WBX8 426 aa18.33■□□□□ 0.52
TUBB3-211ENST00000556536 MMS22LQ6ZRQ5 1243 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms