RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 UBXN4Q92575 508 aa11.38□□□□□ -0.59
LINC01550-206ENST00000556462 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
LINC01550-206ENST00000556462 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
LINC01550-206ENST00000556462 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC01550-206ENST00000556462 PRKAG2Q9UGJ0 569 aa11.38□□□□□ -0.59
LINC01550-206ENST00000556462 VWA8A3KMH1 1905 aa11.38□□□□□ -0.59
LINC01550-206ENST00000556462 PSTPIP1O43586 416 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 LRCH4O75427 683 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 FGBP02675 491 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 PDGFRAP16234 1089 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 PPIGQ13427 754 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 ACAP1Q15027 740 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 CTXN3Q4LDR2 81 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 ATP13A4Q4VNC1 1196 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 RSPO2Q6UXX9 243 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 ARCQ7LC44 396 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 GPRIN1Q7Z2K8 1008 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 GOLGA1Q92805 767 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 IGSF21Q96ID5 467 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 VN1R3Q9BXE9 311 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 LRRC4Q9HBW1 653 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 PGRMC1O00264 195 aaKnown RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 FGGP02679 453 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 GPD1P21695 349 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 TKTL1P51854 596 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 MRPS5P82675 430 aaKnown RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 FPGSQ05932 587 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 LRRC38Q5VT99 294 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 C4orf50Q6ZRC1 276 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 SPATA2LQ8IUW3 424 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 CMTR2Q8IYT2 770 aaKnown RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 CFAP57Q96MR6 1250 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 CNPY3Q9BT09 278 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 TTPALQ9BTX7 342 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 EPC1Q9H2F5 836 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 RBM12Q9NTZ6 932 aaKnown RBP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC01550-206ENST00000556462 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
LINC01550-206ENST00000556462 OR6C75A6NL08 312 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 CYP2F1P24903 491 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 IL1R2P27930 398 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 TUBB4BP68371 445 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 SLC25A11Q02978 314 aaKnown RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ELF2Q15723 593 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 C15orf59Q2T9L4 293 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 RAB6CQ53S08 254 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ZNF280DQ6N043 979 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 KATNAL2Q8IYT4 538 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 DCP1BQ8IZD4 617 aaKnown RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 C11orf84Q9BUA3 381 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 RAB6CQ9H0N0 254 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 PNPLA8Q9NP80 782 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 CHST7Q9NS84 486 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ASNSD1Q9NWL6 643 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 CXXC1Q9P0U4 656 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 NR2E1Q9Y466 385 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 MRPL42Q9Y6G3 142 aaKnown RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 DPYSL4O14531 572 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 GJB5O95377 273 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 SSR1P43307 286 aaKnown RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ANKS3Q6ZW76 656 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 MMGT1Q8N4V1 131 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
LINC01550-206ENST00000556462 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ULBP1Q9BZM6 244 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 CNGB3Q9NQW8 809 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 USP3Q9Y6I4 520 aa11.36□□□□□ -0.59
LINC01550-206ENST00000556462 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 TNFRSF10BO14763 440 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 RNF8O76064 485 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC01550-206ENST00000556462 SYN1P17600 705 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 TFE3P19532 575 aaPredicted RBP11.35□□□□□ -0.59
LINC01550-206ENST00000556462 MIPP30301 263 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 PCK1P35558 622 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 DAOAP59103 153 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 YWHAZP63104 245 aaKnown RBP11.35□□□□□ -0.59
LINC01550-206ENST00000556462 HTRA4P83105 476 aaPredicted RBP11.35□□□□□ -0.59
LINC01550-206ENST00000556462 GPR17Q13304 367 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 LONRF2Q1L5Z9 754 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 USP41Q3LFD5 358 aa11.35□□□□□ -0.59
LINC01550-206ENST00000556462 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms