RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 PARP14Q460N5 1801 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 MYH6P13533 1939 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PRUNE2Q8WUY3 3088 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 KPNA6O60684 536 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 EFCAB14O75071 495 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 KRT37O76014 449 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 GOLGA8HP0CJ92 632 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TXNP10599 105 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PCP11498 1178 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 CYP2C9P11712 490 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 SDSP20132 328 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 BMP5P22003 454 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 CST5P28325 142 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 SCNN1GP51170 649 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ALDH5A1P51649 535 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TRDNQ13061 729 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ACAP1Q15027 740 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PPP2R5BQ15173 497 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 RAB30Q15771 203 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 DUSP28Q4G0W2 176 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ARHGEF16Q5VV41 709 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 CCSAPQ6IQ19 270 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TAPT1Q6NXT6 567 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PSRC1Q6PGN9 363 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 SEPT14Q6ZU15 432 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 GAREM2Q75VX8 874 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 MTERF4Q7Z6M4 381 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 DEFB128Q7Z7B8 93 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ZSCAN30Q86W11 494 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TICAM2Q86XR7 235 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 E2F7Q96AV8 911 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ARL8AQ96BM9 186 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 EXOC2Q96KP1 924 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 MAP7D2Q96T17 732 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TCF25Q9BQ70 676 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 UBAC1Q9BSL1 405 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 KRT23Q9C075 422 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 RANBP17Q9H2T7 1088 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TTYH1Q9H313 450 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PRDM12Q9H4Q4 367 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 RRAGDQ9NQL2 400 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 TCP11L1Q9NUJ3 509 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 NCDNQ9UBB6 729 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 HECAQ9UBI9 543 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 Q9Y3F1 56 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 ROBO3Q96MS0 1386 aa4.48□□□□□ -1.69
ATXN3-240ENST00000556339 PRRC2BQ5JSZ5 2229 aaKnown RBP4.48□□□□□ -1.69
ATXN3-240ENST00000556339 CCDC171Q6TFL3 1326 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 TTC28Q96AY4 2481 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ZNF236Q9UL36 1845 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 A0A0D9SFI3 127 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ERICH2A1L162 156 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ADCY6O43306 1168 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 FAM20BO75063 409 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 RASGRP1O95267 797 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 CFBP00751 764 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 CD4P01730 458 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 PARP1P09874 1014 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 FAM153BP0C7A2 387 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 PDHBP11177 359 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 MYCLP12524 364 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ATP2A2P16615 1042 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 NCLP19338 710 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 RABGGTBP53611 331 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 RPS6P62753 249 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 IRF9Q00978 393 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ZNF543Q08ER8 600 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 BFSP2Q13515 415 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 STXBP2Q15833 593 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 IMMTQ16891 758 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 TM4SF20Q53R12 229 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 BTNL9Q6UXG8 535 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 DGKHQ86XP1 1220 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ULK2Q8IYT8 1036 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 NSUN6Q8TEA1 469 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 SCFD2Q8WU76 684 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 UBE2Q2Q8WVN8 375 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 RUFY2Q8WXA3 655 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 HERVK_113Q902F9 699 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 HAS1Q92839 578 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 PGBD4Q96DM1 585 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 SCLYQ96I15 445 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 PDLIM2Q96JY6 352 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 CELF4Q9BZC1 486 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ALDH8A1Q9H2A2 487 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 LMBRD1Q9NUN5 540 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 TRMT13Q9NUP7 481 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 TBX21Q9UL17 535 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
ATXN3-240ENST00000556339 MSRB2Q9Y3D2 182 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ATP6V1DQ9Y5K8 247 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 B3GALT1Q9Y5Z6 326 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 MYO7AQ13402 2215 aa4.47□□□□□ -1.69
ATXN3-240ENST00000556339 ASTN1O14525 1302 aa4.46□□□□□ -1.69
ATXN3-240ENST00000556339 TNKSO95271 1327 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms