RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 DCLK1O15075 740 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 APBB3O95704 486 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 NFICP08651 508 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 SPINK2P20155 84 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 DRD1P21728 446 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 DGKEP52429 567 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 LILRA4P59901 499 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 TMEM132DQ14C87 1099 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 KYAT1Q16773 422 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 C2orf27AQ580R0 203 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 SPATA1Q5VX52 437 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 JADE1Q6IE81 842 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 METTL23Q86XA0 190 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 CCDC83Q8IWF9 413 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 CPA6Q8N4T0 437 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 STKLD1Q8NE28 680 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 SPPL2BQ8TCT7 592 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 THAP3Q8WTV1 239 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 EXOC4Q96A65 974 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 ACDQ96AP0 544 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 CHFRQ96EP1 664 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PLIN2Q99541 437 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 P2RY13Q9BPV8 354 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PLCD4Q9BRC7 762 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PYM1Q9BRP8 204 aaKnown RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 NTPCRQ9BSD7 190 aaKnown RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 MSTO1Q9BUK6 570 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 KIF9Q9HAQ2 790 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 TDP1Q9NUW8 608 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 FAM13BQ9NYF5 915 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 ZMYM5Q9UJ78 669 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 DSEQ9UL01 958 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 MAGED2Q9UNF1 606 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 INVSQ9Y283 1065 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PCDHB6Q9Y5E3 794 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PLXND1Q9Y4D7 1925 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 GON4LQ3T8J9 2241 aa6.27□□□□□ -1.4
PRKCH-220ENST00000556164 NPHP3-ACAD11A0A0J9YXS1 232 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 K7ENM7 598 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 LAD1O00515 517 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CYB561D2O14569 222 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 KHNYNO15037 678 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 OGTO15294 1046 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TSPAN6O43657 245 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FAM189A1O60320 539 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TOP3BO95985 862 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CYP11A1P05108 521 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 KRT18P05783 430 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 HAPLN1P10915 354 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 DDX6P26196 483 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 GJA4P35212 333 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TOB1P50616 345 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 GALK1P51570 392 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 NCKAP1LP55160 1127 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 WNT7BP56706 349 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 NLRP12P59046 1061 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 SMARCB1Q12824 385 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 SQSTM1Q13501 440 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 DHX8Q14562 1220 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 DMC1Q14565 340 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 MTF1Q14872 753 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 PDGFRLQ15198 375 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 IL17AQ16552 155 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 UAP1L1Q3KQV9 507 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FOXD4L6Q3SYB3 417 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FBXO43Q4G163 708 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 C9orf57Q5W0N0 161 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TXNDC8Q6A555 127 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FOXD4L3Q6VB84 417 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 DTHD1Q6ZMT9 781 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 SYT13Q7L8C5 426 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CYP2U1Q7Z449 544 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TMEM150AQ86TG1 271 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 THEM5Q8N1Q8 247 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 SYT2Q8N9I0 419 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FAM184AQ8NB25 1140 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TSTD1Q8NFU3 115 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 FBXO18Q8NFZ0 1043 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 RIN3Q8TB24 985 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 C2orf15Q8WU43 125 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 MRPS31Q92665 395 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CD101Q93033 1021 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CCDC74AQ96AQ1 378 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 CDK5RAP3Q96JB5 506 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
PRKCH-220ENST00000556164 MMTAG2Q9BU76 263 aaKnown RBP6.27□□□□□ -1.41
PRKCH-220ENST00000556164 TPSD1Q9BZJ3 242 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms