RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 SMOC2Q9H3U7 446 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 KMT5AQ9NQR1 393 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 SEMA4GQ9NTN9 838 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 GEMIN8Q9NWZ8 242 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 SLC5A4Q9NY91 659 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 TRPM5Q9NZQ8 1165 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 KCMF1Q9P0J7 381 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 NCDNQ9UBB6 729 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 AFG3L2Q9Y4W6 797 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 SH3TC1Q8TE82 1336 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 RFX7Q2KHR2 1363 aa3.61□□□□□ -1.83
EFCAB11-210ENST00000556078 LOC102724159A0A0B4J2E5 919 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 SRRM3A6NNA2 597 aaPredicted RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 MBTPS2O43462 519 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 NDUFA10O95299 355 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 PROS1P07225 676 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 JMJD7P0C870 316 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 CYBAP13498 195 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 APOBEC3AP31941 199 aaPredicted RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 DNM2P50570 870 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 RBM5P52756 815 aaKnown RBP eCLIP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 EPHB1P54762 984 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 TBX4P57082 545 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 TMPRSS15P98073 1019 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 GUCY1B3Q02153 619 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 SIGLEC14Q08ET2 396 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 MPP3Q13368 585 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 PPIGQ13427 754 aaKnown RBP eCLIP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 BIRC2Q13490 618 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 DCTN1Q14203 1278 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 PWP2Q15269 919 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 FSTL4Q6MZW2 842 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 SLC4A10Q6U841 1118 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 STRA8Q7Z7C7 330 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 RNF180Q86T96 592 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 PLXDC1Q8IUK5 500 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 RAVER1Q8IY67 606 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 RUNDC1Q96C34 613 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 DYDC2Q96IM9 177 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 TTC1Q99614 292 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 DUSP26Q9BV47 211 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 LSM14BQ9BX40 385 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 CPEB1Q9BZB8 566 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 INTS7Q9NVH2 962 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 POLR3BQ9NW08 1133 aaPredicted RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 ZNF112Q9UJU3 913 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 MTUS1Q9ULD2 1270 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 TNPO3Q9Y5L0 923 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 ABCA12Q86UK0 2595 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 MGAQ8IWI9 3026 aa3.6□□□□□ -1.83
EFCAB11-210ENST00000556078 ARHGEF17Q96PE2 2063 aaPredicted RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 UTP20O75691 2785 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CACNA1IQ9P0X4 2223 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CNOT1A5YKK6 2376 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PATJQ8NI35 1801 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ATMQ13315 3056 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 GSG1L2A8MUP6 293 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 DIRC3C9JPN6 131 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 KBTBD13C9JR72 458 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CXCL11O14625 94 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PI15O43692 258 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 EFCAB14O75071 495 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PROP1O75360 226 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 C1QL1O75973 258 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PRLP01236 227 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 FGBP02675 491 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PRB1P04280 392 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 EGR2P11161 476 aaPredicted RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ATP2A2P16615 1042 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CCT4P50991 539 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 IL2P60568 153 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 GABREP78334 506 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ROM1Q03395 351 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 DMWDQ09019 674 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 TMEM132BQ14DG7 1078 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PCBP1Q15365 356 aaKnown RBP eCLIP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 FAM214AQ32MH5 1076 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 RNF219Q5W0B1 726 aaPredicted RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ZNF425Q6IV72 752 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PSRC1Q6PGN9 363 aaPredicted RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 MCM10Q7L590 875 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ANKRD33Q7Z3H0 272 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 FAM83AQ86UY5 434 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ZBTB46Q86UZ6 589 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 PASD1Q8IV76 773 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CHPFQ8IZ52 775 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 MYO1HQ8N1T3 1032 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 OR2W6PQ8NHA6 318 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 UPF3BQ9BZI7 483 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 COA1Q9GZY4 146 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CCDC8Q9H0W5 538 aaPredicted RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 WNT8AQ9H1J5 351 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CD209Q9NNX6 404 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 NOB1Q9ULX3 412 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 ZHX2Q9Y6X8 837 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 MYH13Q9UKX3 1938 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 UTYO14607 1347 aa3.59□□□□□ -1.83
EFCAB11-210ENST00000556078 CNTNAP2Q9UHC6 1331 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms