RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PNPLA8Q9NP80 782 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 LZTFL1Q9NQ48 299 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 AVENQ9NQS1 362 aaPredicted RBP11.63□□□□□ -0.55
TMEM260-208ENST00000555905 WDR35Q9P2L0 1181 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 MYO1AQ9UBC5 1043 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 HSFX1Q9UBD0 423 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CNOT8Q9UFF9 292 aaKnown RBP11.63□□□□□ -0.55
TMEM260-208ENST00000555905 SCINQ9Y6U3 715 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 NCANO14594 1321 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 A0A0A6YYK5 440 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 A0A1W2PPC1 479 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 C2orf71A6NGG8 1288 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 USP27XA6NNY8 438 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 E5RJQ4 531 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 F8VP50 259 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 FSCN2O14926 492 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 CSPG5O95196 566 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 ERBB2P04626 1255 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 HAPLN1P10915 354 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 LCP1P13796 627 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 ATF2P15336 505 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 RRM1P23921 792 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 KLRC2P26717 231 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 NOP2P46087 812 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 RPL34P49207 117 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 TUFMP49411 452 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 CACNA2D1P54289 1103 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 PTP4A2Q12974 167 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 DUSP4Q13115 394 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 IFI16Q16666 785 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 C2CD6Q53TS8 623 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 DNAJC24Q6P3W2 148 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 ZDHHC17Q8IUH5 632 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 RHOT2Q8IXI1 618 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 RFFLQ8WZ73 363 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
TMEM260-208ENST00000555905 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 LACRTQ9GZZ8 138 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 CYP4F11Q9HBI6 524 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 CTTNBP2NLQ9P2B4 639 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 UVRAGQ9P2Y5 699 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 GUCA1BQ9UMX6 200 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 TFR2Q9UP52 801 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
TMEM260-208ENST00000555905 A0A0U1RQJ8 604 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 GOLGA8SH3BPF8 625 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 PIK3R2O00459 728 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 PRRG1O14668 218 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 FBXO21O94952 628 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 VNN2O95498 520 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ARHGAP25P42331 645 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ALDH1A3P47895 512 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 TKTL1P51854 596 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 GSCP56915 257 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ADIGQ0VDE8 80 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 PTPROQ16827 1216 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 RAB41Q5JT25 222 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 PHLDB2Q86SQ0 1253 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 XYLT1Q86Y38 959 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 SCUBE3Q8IX30 993 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
TMEM260-208ENST00000555905 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 SLC35G2Q8TBE7 412 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 CEP295NLQ96MC4 621 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 SELENOOQ9BVL4 669 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 TRIM10Q9UDY6 481 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 DUSP10Q9Y6W6 482 aa11.61□□□□□ -0.55
TMEM260-208ENST00000555905 ESPNB1AK53 854 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 SART1O43290 800 aaKnown RBP11.6□□□□□ -0.55
TMEM260-208ENST00000555905 TGM5O43548 720 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 KIF5CO60282 957 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 RTN3O95197 1032 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-208ENST00000555905 GLUD1P00367 558 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 C1RP00736 705 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 SLC6A3Q01959 620 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 PLD1Q13393 1074 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 MAMLD1Q13495 774 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 CAMK1Q14012 370 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 DDR2Q16832 855 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 LRIT3Q3SXY7 679 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 FAM102AQ5T9C2 384 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms