RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ATF6P18850 670 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 MMP8P22894 467 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 GABRB2P47870 512 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 SPA17Q15506 151 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 TAF12Q16514 161 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 CCDC122Q5T0U0 273 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 SCML4Q8N228 414 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 CMASQ8NFW8 434 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 IPO4Q8TEX9 1081 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 C18orf8Q96DM3 657 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 EIF3CQ99613 913 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 LUC7LQ9NQ29 371 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ST7Q9NRC1 585 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 USP3Q9Y6I4 520 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 SOWAHDA6NJG2 315 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SART1O43290 800 aaKnown RBP13.13□□□□□ -0.31
SHMT2-221ENST00000555773 NDUFA10O95299 355 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 MYBL1P10243 752 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 YWHAQP27348 245 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 GPR15P49685 360 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 RGS7P49802 495 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SLC5A3P53794 718 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 KRT83P78385 493 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF268Q14587 947 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-221ENST00000555773 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 CTC1Q2NKJ3 1217 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 LLGL2Q6P1M3 1020 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-221ENST00000555773 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 MTMR10Q9NXD2 777 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 WDR35Q9P2L0 1181 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 UXTQ9UBK9 157 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-221ENST00000555773 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 TSC2P49815 1807 aa13.13□□□□□ -0.31
SHMT2-221ENST00000555773 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 FAM92AA1XBS5 289 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 ANKRD62A6NC57 917 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 FGF19O95750 216 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 ZBED1O96006 694 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PTPN2P17706 415 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHMT2-221ENST00000555773 SCNN1AP37088 669 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PPP3CCP48454 512 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 TKTL1P51854 596 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PTPN20Q4JDL3 420 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
SHMT2-221ENST00000555773 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 Q7L0L9 218 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PABPC5Q96DU9 382 aaKnown RBP13.12□□□□□ -0.31
SHMT2-221ENST00000555773 TRMT2BQ96GJ1 504 aaKnown RBP13.12□□□□□ -0.31
SHMT2-221ENST00000555773 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 TAS2R14Q9NYV8 317 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
SHMT2-221ENST00000555773 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
SHMT2-221ENST00000555773 E5RJQ4 531 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 RFPL2O75678 378 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GABBR2O75899 941 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GLP2RO95838 553 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 LCP1P13796 627 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 HMGA1P17096 107 aaKnown RBP13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MAGEA1P43355 309 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GSCP56915 257 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GPC5P78333 572 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
SHMT2-221ENST00000555773 CCZ1BP86790 482 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms