RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RIN3Q8TB24 985 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 SMARCD1Q96GM5 515 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 NACA2Q9H009 215 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 TRAF3IP3Q9Y228 551 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 NME7Q9Y5B8 376 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 CPQQ9Y646 472 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 FAM237AA0A1B0GTK4 181 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 K7ESF4 209 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 MAPK13O15264 365 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 RNF40O75150 1001 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 AP1G2O75843 785 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 ZNF202O95125 648 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 VNN1O95497 513 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 HOXA6P31267 233 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 SLC7A9P82251 487 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 DMWDQ09019 674 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 DPYDQ12882 1025 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 OVCA2Q8WZ82 227 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 CHFRQ96EP1 664 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
SNX6-205ENST00000555648 PRR5-ARHGAP8B1AHC4 643 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 HRO43593 1189 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 RETP07949 1114 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
SNX6-205ENST00000555648 NDST1P52848 882 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 CACNA2D1P54289 1103 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 ARHGAP8P85298 464 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 ADAM9Q13443 819 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 HECTD3Q5T447 861 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 WDR5BQ86VZ2 330 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 UNC93AQ86WB7 457 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 GUF1Q8N442 669 aaKnown RBP16.37■□□□□ 0.21
SNX6-205ENST00000555648 ACDQ96AP0 544 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 ELMO3Q96BJ8 720 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 KCNK16Q96T55 309 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 LINC00597Q9H2U6 94 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.212e-9■■■■■ 223.6
SNX6-205ENST00000555648 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 CFAP97Q9P2B7 532 aa16.37■□□□□ 0.21
SNX6-205ENST00000555648 CDV3Q9UKY7 258 aaKnown RBP16.37■□□□□ 0.21
SNX6-205ENST00000555648 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
SNX6-205ENST00000555648 COL4A2P08572 1712 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 ASS1P00966 412 aaKnown RBP16.36■□□□□ 0.21
SNX6-205ENST00000555648 GCLMP48507 274 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 SLC5A3P53794 718 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 SPEM2Q0P670 501 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 SRSF5Q13243 272 aaKnown RBP16.36■□□□□ 0.21
SNX6-205ENST00000555648 NFIL3Q16649 462 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 RSPO4Q2I0M5 234 aaPredicted RBP16.36■□□□□ 0.21
SNX6-205ENST00000555648 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 CAMKK1Q8N5S9 505 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 KIAA1958Q8N8K9 716 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 RPLP0P6Q8NHW5 317 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 RNF38Q9H0F5 515 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 SDCBP2Q9H190 292 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 COMMD8Q9NX08 183 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 CHORDC1Q9UHD1 332 aaPredicted RBP16.36■□□□□ 0.21
SNX6-205ENST00000555648 SH3BP1Q9Y3L3 701 aa16.36■□□□□ 0.21
SNX6-205ENST00000555648 EP300Q09472 2414 aaPredicted RBP16.36■□□□□ 0.21
SNX6-205ENST00000555648 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 AKAP3O75969 853 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 ADH1CP00326 375 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
SNX6-205ENST00000555648 FAM200BP0CF97 657 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 TRIM49P0CI25 452 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 TRIM49CP0CI26 452 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 CCDC130P13994 396 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 PXNP49023 591 aaPredicted RBP16.35■□□□□ 0.21
SNX6-205ENST00000555648 ORC1Q13415 861 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 SPOPLQ6IQ16 392 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 PKN3Q6P5Z2 889 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 SLC2A14Q8TDB8 520 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 TSG101Q99816 390 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 NT5C1AQ9BXI3 368 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 GOLPH3LQ9H4A5 285 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 FBXO44Q9H4M3 255 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 CYP3A43Q9HB55 503 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 FBRSL1Q9HCM7 1045 aaKnown RBP16.35■□□□□ 0.21
SNX6-205ENST00000555648 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 C2orf42Q9NWW7 574 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 TBC1D14Q9P2M4 693 aa16.35■□□□□ 0.21
SNX6-205ENST00000555648 HOOK1Q9UJC3 728 aaKnown RBP16.35■□□□□ 0.21
SNX6-205ENST00000555648 GVINP1Q7Z2Y8 2422 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 CCDC163A0A0D9SF12 145 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 CETN3O15182 167 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 STX10O60499 249 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 LRP3O75074 770 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 RPP40O75818 363 aaKnown RBP16.34■□□□□ 0.21
SNX6-205ENST00000555648 SMC2O95347 1197 aa16.34■□□□□ 0.21
SNX6-205ENST00000555648 OLFM2O95897 454 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms