RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 WASF3Q9UPY6 502 aa14.15□□□□□ -0.14
TUBB3-208ENST00000555576 CPQQ9Y646 472 aa14.15□□□□□ -0.14
TUBB3-208ENST00000555576 FREM2Q5SZK8 3169 aa14.15□□□□□ -0.14
TUBB3-208ENST00000555576 MYOFQ9NZM1 2061 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 THADAQ6YHU6 1953 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 EIF2DP41214 584 aaKnown RBP14.14□□□□□ -0.15
TUBB3-208ENST00000555576 PPP3CCP48454 512 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 PSMD6Q15008 389 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 DHCR24Q15392 516 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
TUBB3-208ENST00000555576 C2orf27AQ580R0 203 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 ANO7Q6IWH7 933 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 PHTF2Q8N3S3 785 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 ZNF507Q8TCN5 953 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 ZFRQ96KR1 1074 aaKnown RBP14.14□□□□□ -0.15
TUBB3-208ENST00000555576 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 ZNF518BQ9C0D4 1074 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 KIAA1586Q9HCI6 787 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 INVSQ9Y283 1065 aa14.14□□□□□ -0.15
TUBB3-208ENST00000555576 A0A0A0MRY4 1105 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 CDX4O14627 284 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 GIPC1O14908 333 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 STAU1O95793 577 aaKnown RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 FAM163BP0C2L3 166 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 ANXA13P27216 316 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 GBP1P32455 592 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 GNL1P36915 607 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 KIR2DL1P43626 348 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 SLC6A11P48066 632 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 MRPS21P82921 87 aaKnown RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 CYP24A1Q07973 514 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 TAF10Q12962 218 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 USP39Q53GS9 565 aaKnown RBP14.13□□□□□ -0.15
TUBB3-208ENST00000555576 RHBDF2Q6PJF5 856 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 C11orf74Q86VG3 221 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 IL17RCQ8NAC3 791 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 SCFD1Q8WVM8 642 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 ELOVL4Q9GZR5 314 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 SMPD4Q9NXE4 827 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 EHD2Q9NZN4 543 aa14.13□□□□□ -0.15
TUBB3-208ENST00000555576 DMXL2Q8TDJ6 3036 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 C4orf47A7E2U8 309 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 PATE3B3GLJ2 98 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 SGK1O00141 431 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 CLDN5O00501 218 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 ADAM23O75077 832 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 DLATP10515 647 aaKnown RBP14.12□□□□□ -0.15
TUBB3-208ENST00000555576 PTPN1P18031 435 aaKnown RBP14.12□□□□□ -0.15
TUBB3-208ENST00000555576 P2RY2P41231 377 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 CCDC33Q8N5R6 958 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 ALLCQ8N6M5 410 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 B3GALNT2Q8NCR0 500 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 PLEKHO2Q8TD55 490 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 INTS4Q96HW7 963 aaKnown RBP14.12□□□□□ -0.15
TUBB3-208ENST00000555576 CHAMP1Q96JM3 812 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 FNBP1Q96RU3 617 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 DUSP9Q99956 384 aaKnown RBP14.12□□□□□ -0.15
TUBB3-208ENST00000555576 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-208ENST00000555576 B3GNT5Q9BYG0 378 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 CUEDC2Q9H467 287 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 CFAP97Q9P2B7 532 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 UBE4BO95155 1302 aa14.12□□□□□ -0.15
TUBB3-208ENST00000555576 ASCC3Q8N3C0 2202 aaKnown RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 FAM208BQ5VWN6 2430 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 FAM92AA1XBS5 289 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 TNFRSF10BO14763 440 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 COCHO43405 550 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 KAT7O95251 611 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 NOVA1P51513 510 aaKnown RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 BMT2Q1RMZ1 405 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 WDR72Q3MJ13 1102 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 FAM26FQ5R3K3 315 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 SNX30Q5VWJ9 437 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 SHC4Q6S5L8 630 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 PAQR9Q6ZVX9 377 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 HS2ST1Q7LGA3 356 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 CYP2U1Q7Z449 544 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 ETFBKMTQ8IXQ9 262 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 RDH13Q8NBN7 331 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 TXNDC5Q8NBS9 432 aaKnown RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 OR6B3Q8NGW1 331 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 C7orf25Q9BPX7 421 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 ZSCAN16Q9H4T2 348 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 VRTNQ9H8Y1 702 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 IL37Q9NZH6 218 aa14.11□□□□□ -0.15
TUBB3-208ENST00000555576 MBD1Q9UIS9 605 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 R3HCC1Q9Y3T6 440 aaKnown RBP14.11□□□□□ -0.15
TUBB3-208ENST00000555576 MYO18AQ92614 2054 aaKnown RBP14.1□□□□□ -0.15
TUBB3-208ENST00000555576 SLC9A3R1O14745 358 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-208ENST00000555576 PPP6R2O75170 966 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms