RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GABBR2O75899 941 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 F11P03951 625 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 KCNA5P22460 613 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 ACADSBP45954 432 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 PPP3CCP48454 512 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 SLC5A3P53794 718 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 ADKP55263 362 aaKnown RBP13.38□□□□□ -0.27
SYNE2-219ENST00000555323 USP46P62068 366 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 PM20D1Q6GTS8 502 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 ZNF571Q7Z3V5 609 aaPredicted RBP13.38□□□□□ -0.27
SYNE2-219ENST00000555323 GRASPQ7Z6J2 395 aaPredicted RBP13.38□□□□□ -0.27
SYNE2-219ENST00000555323 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 SLC30A5Q8TAD4 765 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 GPR152Q8TDT2 470 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 PCDHB18PQ96TA0 734 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 UXTQ9UBK9 157 aaPredicted RBP13.38□□□□□ -0.27
SYNE2-219ENST00000555323 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 CEP83Q9Y592 693 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 NCANO14594 1321 aa13.38□□□□□ -0.27
SYNE2-219ENST00000555323 REV3LO60673 3130 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SOBPA7XYQ1 873 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 ZNF197O14709 1029 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 MBTPS2O43462 519 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 FGF19O95750 216 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 RHOP08100 348 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SKILP12757 684 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 YWHAQP27348 245 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 MTHFRP42898 656 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 NOMO3P69849 1222 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SMAD4Q13485 552 aaKnown RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 TAF12Q16514 161 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 CYP4A22Q5TCH4 519 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 GAREM2Q75VX8 874 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 GPRIN1Q7Z2K8 1008 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 TMEM150AQ86TG1 271 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 OVCA2Q8WZ82 227 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 NECTIN4Q96NY8 510 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 LRRC4Q9HBW1 653 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
SYNE2-219ENST00000555323 CNGB3Q9NQW8 809 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 ASAH2Q9NR71 780 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
SYNE2-219ENST00000555323 MOSPD3O75425 235 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 ZDHHC11BP0C7U3 371 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 GZMAP12544 262 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 TNFAIP3P21580 790 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 FECHP22830 423 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 GABRB2P47870 512 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 TKTL1P51854 596 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 SNX16P57768 344 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 CENPCQ03188 943 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 PDCLQ13371 301 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 ASTE1Q2TB18 679 aaPredicted RBP13.36□□□□□ -0.27
SYNE2-219ENST00000555323 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 ZNF276Q8N554 614 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 PPP1R13BQ96KQ4 1090 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
SYNE2-219ENST00000555323 USP15Q9Y4E8 981 aaPredicted RBP13.36□□□□□ -0.27
SYNE2-219ENST00000555323 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
SYNE2-219ENST00000555323 GRXCR2A6NFK2 248 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 DDX3XO00571 662 aaKnown RBP eCLIP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PLEKP08567 350 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 MMP8P22894 467 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CDC25CP30307 473 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CCR2P41597 374 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 RGS7P49802 495 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 NTHL1P78549 312 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 GOLGA8FQ08AF8 430 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 GOLGA8DPQ0D2H9 430 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 TAF10Q12962 218 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CLEC16AQ2KHT3 1053 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PTPN20Q4JDL3 420 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms