RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 WEE2P0C1S8 567 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 GRIK3Q13003 919 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PKN2Q16513 984 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ZCCHC8Q6NZY4 707 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 NOTUMQ6P988 496 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ULK3Q6PHR2 472 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PPP1R10Q96QC0 940 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PTPRHQ9HD43 1115 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 BSDC1Q9NW68 430 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PRAMEF22A3QJZ6 481 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PSMD14O00487 310 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RTN2O75298 545 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 GLRBP48167 497 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SERPINB9P50453 376 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CRYMQ14894 314 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RNF180Q86T96 592 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PRUNE1Q86TP1 453 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 MYO1HQ8N1T3 1032 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PMM1Q92871 262 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 TMEM169Q96HH4 297 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PI4K2AQ9BTU6 479 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PRRG3Q9BZD7 231 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 WDR41Q9HAD4 459 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 MIEF1Q9NQG6 463 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SLC35C2Q9NQQ7 365 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 UBAP1Q9NZ09 502 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 MBD2Q9UBB5 411 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM10Q9UDY6 481 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 FAM187AA6NFU0 413 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 OR6B1O95007 311 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 LTFP02788 710 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 VAV1P15498 845 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 MSH3P20585 1137 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 IL6STP40189 918 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RGL4Q8IZJ4 473 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 HASPINQ8TF76 798 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 HPDLQ96IR7 371 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RNPC3Q96LT9 517 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 AGPAT1Q99943 283 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RANBP17Q9H2T7 1088 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 NT5MQ9NPB1 228 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SOHLH2Q9NX45 425 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SNUPNO95149 360 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 IRX1P78414 480 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 KRT74Q7RTS7 529 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RBBP8NLQ8NC74 664 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ABCA5Q8WWZ7 1642 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 FIG4Q92562 907 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CTNNAL1Q9UBT7 734 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ARL2BPQ9Y2Y0 163 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PQBP1O60828 265 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 FAM20BO75063 409 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 KATNA1O75449 491 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 TCEA3O75764 348 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 POLBP06746 335 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ITGALP20701 1170 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 EIF2S3P41091 472 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 IL2P60568 153 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 NDUFAF6Q330K2 333 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 EPC2Q52LR7 807 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 FBXO42Q6P3S6 717 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 GPRC5AQ8NFJ5 357 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PRKD2Q9BZL6 878 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PIGUQ9H490 435 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PCDHA10Q9Y5I2 948 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 IFNA14P01570 189 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 P4HBP07237 508 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 VAC14Q08AM6 782 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 GRM4Q14833 912 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 FAXCQ5TGI0 409 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ENKURQ8TC29 256 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 NT5C1AQ9BXI3 368 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CDC40O60508 579 aaKnown RBP eCLIP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SARSP49591 514 aaKnown RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CPT1AP50416 773 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SREBF2Q12772 1141 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ENOSF1Q7L5Y1 443 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 ATG16L2Q8NAA4 619 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 CASP10Q92851 521 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 RPRD1AQ96P16 312 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-216ENST00000555002 COLEC11Q9BWP8 271 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SLITRK2Q9H156 845 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 SH3BP4Q9P0V3 963 aa7.11□□□□□ -1.27
SYNE2-216ENST00000555002 PIK3CDO00329 1044 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 KLHL2O95198 593 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 AP3M2P53677 418 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FCGRTP55899 365 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PRKCEQ02156 737 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TRAF2Q12933 501 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ORC2Q13416 577 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TSNQ15631 228 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DNAL1Q4LDG9 190 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 HERC6Q8IVU3 1022 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms