RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 KIF4AO95239 1232 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 IGFBP6P24592 240 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 ARL2P36404 184 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 CCR3P51677 355 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 APBA1Q02410 837 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 MAPK7Q13164 816 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 PSMD5Q16401 504 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 PPP2R5EQ16537 467 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 WDR44Q5JSH3 913 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 TAF3Q5VWG9 929 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 IL31Q6EBC2 164 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 ALKBH5Q6P6C2 394 aaKnown RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 MAMSTRQ6ZN01 415 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 CEP57Q86XR8 500 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 PIK3R5Q8WYR1 880 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 DNASE1L2Q92874 299 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 STRA6Q9BX79 667 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 STK33Q9BYT3 514 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 CXCL16Q9H2A7 254 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 ABCB6Q9NP58 842 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 PSD3Q9NYI0 1048 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 NAGPAQ9UK23 515 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 MRPS23Q9Y3D9 190 aaKnown RBP11.82□□□□□ -0.52
SHMT2-216ENST00000554975 DMXL2Q8TDJ6 3036 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 A0A087X0T9 212 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CASTOR2A6NHX0 329 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 F8VZ95 297 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CLIC2O15247 247 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 XYLBO75191 536 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TADA2AO75478 443 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 FAM228BP0C875 321 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CHRNB1P11230 501 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 AARSP49588 968 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CYP2J2P51589 502 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 LIMK1P53667 647 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 NCKAP1LP55160 1127 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CREMQ03060 361 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 DMP1Q13316 513 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 AMHR2Q16671 573 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 AASDHQ4L235 1098 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 FAM171A1Q5VUB5 890 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 HEATR6Q6AI08 1181 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 IRF2BP2Q7Z5L9 587 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CREG2Q8IUH2 290 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 EIF1ADQ8N9N8 165 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 XXYLT1Q8NBI6 393 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 SPATA4Q8NEY3 305 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 DEPTORQ8TB45 409 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 RFFLQ8WZ73 363 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 DDX1Q92499 740 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 FAM3CQ92520 227 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 EXOC4Q96A65 974 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 ELSPBP1Q96BH3 223 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TCEAL4Q96EI5 215 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TTPALQ9BTX7 342 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TLR10Q9BXR5 811 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 SMOC1Q9H4F8 434 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 RBM12Q9NTZ6 932 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 STIM2Q9P246 746 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 GIT1Q9Y2X7 761 aa11.81□□□□□ -0.52
SHMT2-216ENST00000554975 SF3B1O75533 1304 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■■■■■ 37.4
SHMT2-216ENST00000554975 GCN1Q92616 2671 aaKnown RBP11.81□□□□□ -0.52
SHMT2-216ENST00000554975 CCDC188H7C350 402 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 B4GALT5O43286 388 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 PALMO75781 387 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 SASH3O75995 380 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 TOP3BO95985 862 aaKnown RBP11.8□□□□□ -0.52
SHMT2-216ENST00000554975 RHOP08100 348 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 POU2F2P09086 479 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 TMEM253P0C7T8 217 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 SLC9A1P19634 815 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 SPINK2P20155 84 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 AXLP30530 894 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 CXCL12P48061 93 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 CASP4P49662 377 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 GTF2BQ00403 316 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 PTK2Q05397 1052 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 POU5F1BQ06416 359 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 GRIK3Q13003 919 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.52
SHMT2-216ENST00000554975 RPS6KA1Q15418 735 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 MEI1Q5TIA1 1274 aa11.8□□□□□ -0.52
SHMT2-216ENST00000554975 Q6ZS52 159 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms