RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 K7ESF4 209 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 IKBKBO14920 756 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 HRO43593 1189 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ZNF202O95125 648 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 P4HA1P13674 534 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 YWHAQP27348 245 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 HOXC13P31276 330 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 GJA4P35212 333 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 PPP3CCP48454 512 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
PSMC6-207ENST00000554952 DPYDQ12882 1025 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 NR1H3Q13133 447 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 SIM2Q14190 667 aaPredicted RBP12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ZNF77Q15935 545 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ZACNQ401N2 412 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 SV2AQ7L0J3 742 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ACOT1Q86TX2 421 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 CHFRQ96EP1 664 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 TNIP3Q96KP6 325 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 TTLL2Q9BWV7 592 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 SDCBP2Q9H190 292 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.62□□□□□ -0.391e-8■■■■■ 43.5
PSMC6-207ENST00000554952 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 CHORDC1Q9UHD1 332 aaPredicted RBP12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ARHGAP26Q9UNA1 814 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
PSMC6-207ENST00000554952 PTPRDP23468 1912 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 LEFTY2O00292 366 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 ATG13O75143 517 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
PSMC6-207ENST00000554952 EGFP01133 1207 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 PFKLP17858 780 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 NR2F2P24468 414 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 RPL13P26373 211 aaKnown RBP12.61□□□□□ -0.39
PSMC6-207ENST00000554952 VAMP7P51809 220 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 ZXDBP98169 803 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 USP4Q13107 963 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
PSMC6-207ENST00000554952 ORC1Q13415 861 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 ADAM9Q13443 819 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 EML3Q32P44 896 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 NAIF1Q69YI7 327 aaPredicted RBP12.61□□□□□ -0.39
PSMC6-207ENST00000554952 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 LONP2Q86WA8 852 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
PSMC6-207ENST00000554952 TAF4BQ92750 862 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 ATP2A3Q93084 1043 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 RMDN1Q96DB5 314 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 SLC8A2Q9UPR5 921 aa12.61□□□□□ -0.39
PSMC6-207ENST00000554952 RNF40O75150 1001 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 AKAP3O75969 853 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
PSMC6-207ENST00000554952 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 KRT13P13646 458 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 TCF3P15923 654 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 DRD1P21728 446 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 CNR2P34972 360 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 PIK3CAP42336 1068 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 GCLMP48507 274 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 PXNP49023 591 aaPredicted RBP12.6□□□□□ -0.39
PSMC6-207ENST00000554952 EMP3P54852 163 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 SLC7A9P82251 487 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 C1orf220Q5T0J3 134 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 SPOPLQ6IQ16 392 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 PAQR9Q6ZVX9 377 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 SCAMP5Q8TAC9 235 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 CD101Q93033 1021 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 FBXO32Q969P5 355 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
PSMC6-207ENST00000554952 CPQQ9Y646 472 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
PSMC6-207ENST00000554952 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
PSMC6-207ENST00000554952 MAPK13O15264 365 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 AP1G2O75843 785 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 NFATC1O95644 943 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
PSMC6-207ENST00000554952 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 MBL2P11226 248 aaPredicted RBP12.59□□□□□ -0.39
PSMC6-207ENST00000554952 CCDC130P13994 396 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 HOXA6P31267 233 aa12.59□□□□□ -0.39
PSMC6-207ENST00000554952 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
PSMC6-207ENST00000554952 NDST1P52848 882 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms