RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 RNASEH2BQ5TBB1 312 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 MYH9P35579 1960 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 OGTO15294 1046 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 ADCY3O60266 1144 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 ZCCHC18P0CG32 403 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 KDELR1P24390 212 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 RBL1P28749 1068 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 YWHAEP62258 255 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 IFRD2Q12894 506 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF268Q14587 947 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 C6orf163Q5TEZ5 329 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 FBXL18Q96ME1 805 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PGLYRP2Q96PD5 576 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 E5RJQ4 531 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 ERBB2P04626 1255 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 POLNQ7Z5Q5 900 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 PIWIL1Q96J94 861 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 DDX56Q9NY93 547 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 CLUHO75153 1309 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 CREB3O43889 395 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 ASS1P00966 412 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 HMGCRP04035 888 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 DESP17661 470 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 GTF2A2P52657 109 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 GRM1Q13255 1194 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 IL31Q6EBC2 164 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 TMEM154Q6P9G4 183 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 PRPF39Q86UA1 669 aaKnown RBP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 UNC5BQ8IZJ1 945 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
XRCC3-208ENST00000554811 SERAC1Q96JX3 654 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 VPS11Q9H270 941 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
XRCC3-208ENST00000554811 TCRBV9S1A1TA0A576 114 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 MED7O43513 233 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CIB2O75838 187 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 PTDSS1P48651 473 aaKnown RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 WLSQ5T9L3 541 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 MOB2Q70IA6 237 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 SMC1BQ8NDV3 1235 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 SEPT1Q8WYJ6 367 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 HES2Q9Y543 173 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CCDC160A6NGH7 325 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 NPTXRO95502 500 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 DPYSL3Q14195 570 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 KHDC1Q4VXA5 237 aaKnown RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 C1orf146Q5VVC0 180 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 BRSK2Q8IWQ3 736 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 KIAA0319LQ8IZA0 1049 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 DNAJC9Q8WXX5 260 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 ELP3Q9H9T3 547 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 HOXC10Q9NYD6 342 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 STRIP2Q9ULQ0 834 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 SHOC2Q9UQ13 582 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 A0A087WZ62 844 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 A6NJR5 290 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 KRT37O76014 449 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 MICAL2O94851 1124 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 AQP5P55064 265 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CLNKQ7Z7G1 428 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 UTP4Q969X6 686 aaKnown RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 NTPCRQ9BSD7 190 aaKnown RBP12.36□□□□□ -0.43
XRCC3-208ENST00000554811 RNPEPL1Q9HAU8 725 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 CYTH4Q9UIA0 394 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
XRCC3-208ENST00000554811 FCHO1O14526 889 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 ALOX15BO15296 676 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms