RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 L2HGDHQ9H9P8 463 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 ABCB6Q9NP58 842 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 OSGEPQ9NPF4 335 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 LZTFL1Q9NQ48 299 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 AVENQ9NQS1 362 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-230ENST00000554673 PPM1HQ9ULR3 514 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 MYO6Q9UM54 1294 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 PIN4Q9Y237 131 aaKnown RBP6.25□□□□□ -1.41
ATXN3-230ENST00000554673 HYOU1Q9Y4L1 999 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 PCDHB2Q9Y5E7 798 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 PCDHA13Q9Y5I0 950 aa6.25□□□□□ -1.41
ATXN3-230ENST00000554673 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 H0YCG3 227 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 I3L4J1 428 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 DNM1LO00429 736 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 EREGO14944 169 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF185O15231 689 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ZEB2O60315 1214 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 KPNA6O60684 536 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 SRGAP2O75044 1071 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CILPO75339 1184 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 KRT13P13646 458 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 LMO2P25791 158 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CYP2C18P33260 490 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 THPOP40225 353 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 MLH1P40692 756 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PIK3CAP42336 1068 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 MASP1P48740 699 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PGFP49763 221 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ETF1P62495 437 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 NOMO3P69849 1222 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TFAMQ00059 246 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 GCNT1Q02742 428 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TLE2Q04725 743 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 SQSTM1Q13501 440 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 SLC18A3Q16572 532 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 FAM182AQ5T1J6 154 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 OTUD1Q5VV17 481 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 C9orf57Q5W0N0 161 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 AADACL2Q6P093 401 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 SLC39A5Q6ZMH5 540 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CYP4V2Q6ZWL3 525 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 MON1BQ7L1V2 547 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CTU1Q7Z7A3 348 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PHLDB2Q86SQ0 1253 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TTC30AQ86WT1 665 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PPM1KQ8N3J5 372 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 RBBP8NLQ8NC74 664 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PHC3Q8NDX5 983 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CCDC112Q8NEF3 446 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 COG1Q8WTW3 980 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 U2AF1L4Q8WU68 220 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TMEM209Q96SK2 561 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 AGPAT1Q99943 283 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 JPH2Q9BR39 696 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 KATNAL1Q9BW62 490 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 RPF1Q9H9Y2 349 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 RC3H2Q9HBD1 1191 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 FAM105AQ9NUU6 356 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 G3BP2Q9UN86 482 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 PACSIN2Q9UNF0 486 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 FNDC3AQ9Y2H6 1198 aaKnown RBP6.24□□□□□ -1.41
ATXN3-230ENST00000554673 NR2E1Q9Y466 385 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CHD9Q3L8U1 2897 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 REV3LO60673 3130 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 CHD7Q9P2D1 2997 aa6.24□□□□□ -1.41
ATXN3-230ENST00000554673 TMCO5BA8MYB1 307 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 M0R082 166 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SMAD7O15105 426 aaKnown RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DDX3YO15523 660 aaKnown RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 BUB1O43683 1085 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF623O75123 536 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 BEST1O76090 585 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 TPM3P06753 285 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 TNNT1P13805 278 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 TNNI1P19237 187 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 LRPAP1P30533 357 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 BRCC3P46736 316 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 AARSP49588 968 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SCNN1GP51170 649 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ARSDP51689 593 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 PRMT2P55345 433 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 PTPN11Q06124 597 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DSC1Q08554 894 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 KLHL30Q0D2K2 578 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 INCA1Q0VD86 236 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 CLEC16AQ2KHT3 1053 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 PTPN20Q4JDL3 420 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 TXNRD3NBQ6F5E7 133 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 TAF2Q6P1X5 1199 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms