RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HMGB1P09429 215 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 TGFB3P10600 412 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 KCNA2P16389 499 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CASTP20810 708 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 RPS6KB1P23443 525 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 HOXC8P31273 242 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 ETV4P43268 484 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CCL23P55773 120 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 DGKDQ16760 1214 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 HSDL1Q3SXM5 330 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CATSPEREQ5SY80 951 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 PIK3R6Q5UE93 754 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 ZCCHC8Q6NZY4 707 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 XRRA1Q6P2D8 792 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 KCNV1Q6PIU1 500 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 BLOC1S2Q6QNY1 142 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 METTL7BQ6UX53 244 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 ZNF365Q70YC5 407 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 HEATR3Q7Z4Q2 680 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 FILIP1Q7Z7B0 1213 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 DHX37Q8IY37 1157 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 UBXN4Q92575 508 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CUL5Q93034 780 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 SPATA33Q96N06 139 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 C16orf70Q9BSU1 422 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 BOCQ9BWV1 1114 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 BTBD2Q9BX70 525 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 TTYH1Q9H313 450 aaPredicted RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 PCIF1Q9H4Z3 704 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 PIF1Q9H611 641 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 PSTPIP2Q9H939 334 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CD248Q9HCU0 757 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 MTMR10Q9NXD2 777 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 HDAC6Q9UBN7 1215 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 MAGEL2Q9UJ55 1249 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 TCAF1Q9Y4C2 921 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 UBIAD1Q9Y5Z9 338 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 EYSQ5T1H1 3165 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 MICAL3Q7RTP6 2002 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 GRXCR1A8MXD5 290 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 hCG_1984214I3L0E3 225 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ADAMTS3O15072 1205 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 FOXS1O43638 330 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 CDC14BO60729 498 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ATP9AO75110 1047 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PPFIA4O75335 1185 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 LGALS2P05162 132 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PFKMP08237 780 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 IQCF3P0C7M6 154 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 SUPT20HL2P0C7V6 817 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 RFC2P35250 354 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 MEOX1P50221 254 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 METAP2P50579 478 aaKnown RBP eCLIP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 KIF11P52732 1056 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 NAPAP54920 295 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 EVCP57679 992 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 RAC3P60763 192 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 TOB2Q14106 344 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 NEDD9Q14511 834 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 GPNMBQ14956 572 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PTGISQ16647 500 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 TBR1Q16650 682 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PFKFB3Q16875 520 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 KIAA0753Q2KHM9 967 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 TCTN1Q2MV58 587 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 KANK2Q63ZY3 851 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 TCTN3Q6NUS6 607 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 SYNE3Q6ZMZ3 975 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 SPRED1Q7Z699 444 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ZNF713Q8N859 430 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 CAGE1Q8TC20 777 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 AFAP1L1Q8TED9 768 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 DLG3Q92796 817 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PGBD1Q96JS3 809 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 SENP7Q9BQF6 1050 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 KATNAL1Q9BW62 490 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ANO3Q9BYT9 981 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ZDHHC5Q9C0B5 715 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 MLXIPQ9HAP2 919 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 RIC8AQ9NPQ8 531 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 BARHL2Q9NY43 387 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 OAZ3Q9UMX2 235 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PCDHA6Q9UN73 950 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 ZFR2Q9UPR6 939 aaKnown RBP4.72□□□□□ -1.65
VTI1B-203ENST00000554636 STXBP5LQ9Y2K9 1186 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 PRUNE2Q8WUY3 3088 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 SIP14410 1827 aa4.72□□□□□ -1.65
VTI1B-203ENST00000554636 CHD9Q3L8U1 2897 aa4.71□□□□□ -1.65
VTI1B-203ENST00000554636 A0A0G2JNJ9 132 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CCDC196A0A1B0GTZ2 297 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 GSTTP1A0A1W2PQM5 241 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ESYT2A0FGR8 921 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PATE3B3GLJ2 98 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms