RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 CEP295NLQ96MC4 621 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 ELOVL4Q9GZR5 314 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 CUEDC2Q9H467 287 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 BCCIPQ9P287 314 aaKnown RBP eCLIP11.9□□□□□ -0.5
NPC2-205ENST00000554482 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
NPC2-205ENST00000554482 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
NPC2-205ENST00000554482 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
NPC2-205ENST00000554482 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 BCLAF3A2AJT9 711 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 ANTXRLA6NF34 631 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 A8MXQ7 604 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 K7EQS6 105 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 CLDN5O00501 218 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 PHACTR2O75167 634 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 TACC1O75410 805 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 ALDH1A2O94788 518 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 KCNK5O95279 499 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 CST3P01034 146 aaPredicted RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 BCKDHBP21953 392 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 PMLP29590 882 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 TIE1P35590 1138 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 PPP3CCP48454 512 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 NOVA1P51513 510 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 SLC7A9P82251 487 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 BIRC3Q13489 604 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 PSMD6Q15008 389 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 DHCR24Q15392 516 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 E2F4Q16254 413 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 PMS2CLQ68D20 193 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 ALLCQ8N6M5 410 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 XXYLT1Q8NBI6 393 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 B3GALNT2Q8NCR0 500 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 CNOT6LQ96LI5 555 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 LSM14BQ9BX40 385 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 RNF38Q9H0F5 515 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 KBTBD4Q9NVX7 518 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
NPC2-205ENST00000554482 MMP17Q9ULZ9 603 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 NME7Q9Y5B8 376 aa11.89□□□□□ -0.51
NPC2-205ENST00000554482 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 UBE4BO95155 1302 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 TM4SF5O14894 197 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 KHNYNO15037 678 aaKnown RBP11.88□□□□□ -0.51
NPC2-205ENST00000554482 TGFB1I1O43294 461 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 PPP6R2O75170 966 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 KLF8O95600 359 aaPredicted RBP11.88□□□□□ -0.51
NPC2-205ENST00000554482 ADH1CP00326 375 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 OAS1P00973 400 aaKnown RBP11.88□□□□□ -0.51
NPC2-205ENST00000554482 APODP05090 189 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 ADH5P11766 374 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 YWHAQP27348 245 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 CASP1P29466 404 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 SLC6A11P48066 632 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 MYL6P60660 151 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 CRY1Q16526 586 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 GAB4Q2WGN9 574 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 SCARA5Q6ZMJ2 495 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
NPC2-205ENST00000554482 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 C12orf40Q86WS4 652 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPC2-205ENST00000554482 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 PGBD3Q8N328 593 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 TXNDC5Q8NBS9 432 aaKnown RBP11.88□□□□□ -0.51
NPC2-205ENST00000554482 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 SCFD1Q8WVM8 642 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 PNKPQ96T60 521 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 NACA2Q9H009 215 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 BLZF1Q9H2G9 400 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 ZDHHC4Q9NPG8 344 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 ARHGEF4Q9NR80 690 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
NPC2-205ENST00000554482 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
NPC2-205ENST00000554482 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
NPC2-205ENST00000554482 MAP3K13O43283 966 aa11.87□□□□□ -0.51
NPC2-205ENST00000554482 EXOC3O60645 756 aa11.87□□□□□ -0.51
NPC2-205ENST00000554482 CUTAO60888 179 aa11.87□□□□□ -0.51
NPC2-205ENST00000554482 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms