RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 NUDT8Q8WV74 236 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 UCMAQ8WVF2 138 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ART4Q93070 314 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 KLHDC7BQ96G42 594 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SCLYQ96I15 445 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MRGPRX3Q96LB0 322 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PCDHB18PQ96TA0 734 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CDC6Q99741 560 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 APBA2Q99767 749 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZSWIM1Q9BR11 485 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 STK33Q9BYT3 514 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TRIM7Q9C029 511 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 KIAA1683Q9H0B3 1180 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 INTS2Q9H0H0 1204 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 NT5C3AQ9H0P0 336 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DNAJC18Q9H819 358 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CHST7Q9NS84 486 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 HOMER3Q9NSC5 361 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MTMR4Q9NYA4 1195 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MTRF1LQ9UGC7 380 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PCYOX1Q9UHG3 505 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CNOT7Q9UIV1 285 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RASAL2Q9UJF2 1139 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 INTUQ9ULD6 942 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 GRID1Q9ULK0 1009 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CHKBQ9Y259 395 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TAF1LQ8IZX4 1826 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LAMB2P55268 1798 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 KDM3AQ9Y4C1 1321 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MYH11P35749 1972 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ELOA3CA0A087WX78 387 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ELOA3DA6NLF2 546 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FAM86B1E9PN63 330 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PDXKO00764 312 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AKAP10O43572 662 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AOC2O75106 756 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 HIP1RO75146 1068 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SMIM24O75264 130 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RASGRP1O95267 797 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SGPL1O95470 568 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 BAG3O95817 575 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FAM86B2P0C5J1 330 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TPBGLP0DKB5 382 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 T-ENOLP0DO92 83 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 GNAT1P11488 350 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ALAS1P13196 640 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AMPD1P23109 780 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ADH6P28332 368 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 STX2P32856 288 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PCK1P35558 622 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PTDSS1P48651 473 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 NEK2P51955 445 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ITGA8P53708 1063 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 KRT17Q04695 432 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ORC2Q13416 577 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SETDB1Q15047 1291 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SF1Q15637 639 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ELOA3BQ3SY89 546 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TBC1D10BQ4KMP7 808 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 C2CD6Q53TS8 623 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RNF220Q5VTB9 566 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AP1ARQ63HQ0 302 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CCSAPQ6IQ19 270 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MFSD5Q6N075 450 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RNF207Q6ZRF8 634 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FAM43BQ6ZT52 329 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 C14orf80Q86SX3 495 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AMIGO3Q86WK7 504 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MYCT1Q8N699 235 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SYT2Q8N9I0 419 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LINC00116Q8NCU8 138 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ELOA3Q8NG57 546 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ETNPPLQ8TBG4 499 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 VWCEQ96DN2 955 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 IFT74Q96LB3 600 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 C9orf72Q96LT7 481 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RPS6KC1Q96S38 1066 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 NAP1L3Q99457 506 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AGPAT1Q99943 283 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PITPNM3Q9BZ71 974 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 C12orf65Q9H3J6 166 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PCIF1Q9H4Z3 704 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RNPEPL1Q9HAU8 725 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 UBE2TQ9NPD8 197 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 KLHL14Q9P2G3 628 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ASIC3Q9UHC3 531 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DNM3Q9UQ16 869 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 NAALADL1Q9UQQ1 740 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TNPO3Q9Y5L0 923 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FRMPD4Q14CM0 1322 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SYNGAP1Q96PV0 1343 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PITPNM2Q9BZ72 1349 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZNFX1Q9P2E3 1918 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 AGRPO00253 132 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 O00370 1275 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PODXLO00592 558 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PRODHO43272 600 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 THAP12O43422 761 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CHMP2AO43633 222 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms