RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 LIMS2Q7Z4I7 341 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 LRRTM3Q86VH5 581 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 YAF2Q8IY57 180 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CCDC116Q8IYX3 515 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 RGL4Q8IZJ4 473 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 B3GALNT2Q8NCR0 500 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ITFG1Q8TB96 612 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ING5Q8WYH8 240 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 MRPS31Q92665 395 aaKnown RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 EDAQ92838 391 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 FAM122AQ96E09 287 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CEP295NLQ96MC4 621 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 NT5C1BQ96P26 610 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 LPIN3Q9BQK8 851 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 NT5C1AQ9BXI3 368 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 FAM124BQ9H5Z6 455 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 KCNK12Q9HB15 430 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ANO10Q9NW15 660 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
PSEN1-209ENST00000553855 LILRA1O75019 489 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ATP2C2O75185 946 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ADH1CP00326 375 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ASGR2P07307 311 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 DDX6P26196 483 aaKnown RBP eCLIP8.85□□□□□ -0.99
PSEN1-209ENST00000553855 FMO5P49326 533 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 PDE6CP51160 858 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 CDR1P51861 262 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 NDST1P52848 882 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 PFKPQ01813 784 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 SIGLEC14Q08ET2 396 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 DDR2Q16832 855 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 C1orf220Q5T0J3 134 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 GPR158Q5T848 1215 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ACOT1Q86TX2 421 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 SLC35C1Q96A29 364 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 PCED1BQ96HM7 432 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 CNOT6LQ96LI5 555 aaKnown RBP8.85□□□□□ -0.99
PSEN1-209ENST00000553855 FAM81BQ96LP2 452 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 NAT10Q9H0A0 1025 aaKnown RBP8.85□□□□□ -0.99
PSEN1-209ENST00000553855 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 MFSD1Q9H3U5 465 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ZFP14Q9HCL3 533 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 TMLHEQ9NVH6 421 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 ANK1P16157 1881 aa8.85□□□□□ -0.99
PSEN1-209ENST00000553855 SLC38A8A6NNN8 435 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SIAH2O43255 324 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 RTN3O95197 1032 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 LETM1O95202 739 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 VNN2O95498 520 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CEBPBP17676 345 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 ATF6P18850 670 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 AVPR1AP37288 418 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 ASPAP45381 313 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 PPP3CCP48454 512 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 EPHA5P54756 1037 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 FOXK2Q01167 660 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 LRMPQ12912 555 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CUL2Q13617 745 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TEAD2Q15562 447 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 STX1AQ16623 288 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 DPCR1Q3MIW9 517 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CBWD6Q4V339 395 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CBWD3Q5JTY5 395 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CBWD5Q5RIA9 395 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SCARA3Q6AZY7 606 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 DENND5BQ6ZUT9 1274 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TRIM59Q8IWR1 403 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CRYBG2Q8N1P7 616 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 PPM1KQ8N3J5 372 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SLC44A3Q8N4M1 653 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TTC9BQ8N6N2 239 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 ZSCAN18Q8TBC5 510 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 GPT2Q8TD30 523 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 GPR152Q8TDT2 470 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SMARCD1Q96GM5 515 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 C8orf48Q96LL4 319 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 HEXIM2Q96MH2 286 aaKnown RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 SLITRK1Q96PX8 696 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 BCO2Q9BYV7 579 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 EPHX3Q9H6B9 360 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms