RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 COL4A4P53420 1690 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-223ENST00000553686 ATAD5Q96QE3 1844 aa6.83□□□□□ -1.32
ATXN3-223ENST00000553686 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 TBC1D4O60343 1298 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 POU3F2P20265 443 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 PTX3P26022 381 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 STAT2P52630 851 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 NONOQ15233 471 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 KIAA0753Q2KHM9 967 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF528Q3MIS6 628 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 ATAT1Q5SQI0 421 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 SYCE2Q6PIF2 218 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 CMTR2Q8IYT2 770 aaKnown RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 SDR42E1Q8WUS8 393 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 STAG1Q8WVM7 1258 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 CASP10Q92851 521 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF689Q96CS4 500 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 GPR20Q99678 358 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 FOXB1Q99853 325 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 ORAI3Q9BRQ5 295 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 APOL5Q9BWW9 433 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 SMOC2Q9H3U7 446 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 WNT16Q9UBV4 365 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
ATXN3-223ENST00000553686 GMEB2Q9UKD1 530 aa6.82□□□□□ -1.32
ATXN3-223ENST00000553686 KMT2EQ8IZD2 1858 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 MYO7AQ13402 2215 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ENPP3O14638 875 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 GNAI3P08754 354 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 MEOX1P50221 254 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 RAC3P60763 192 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ADAM17P78536 824 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ROM1Q03395 351 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 MTX1Q13505 466 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ICAM4Q14773 271 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 TTF1Q15361 905 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-223ENST00000553686 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 MUM1L1Q5H9M0 696 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 SLC9C2Q5TAH2 1124 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 GMCL1P1Q8NEA9 526 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 DNERQ8NFT8 737 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 VN1R2Q8NFZ6 395 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ATP6V0A1Q93050 837 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-223ENST00000553686 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-223ENST00000553686 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 POMKQ9H5K3 350 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 OXSMQ9NWU1 459 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 ANKFY1Q9P2R3 1169 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 CCPG1Q9ULG6 757 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 DUSP12Q9UNI6 340 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 PCDHGA2Q9Y5H1 932 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 FPGT-TNNI3KV9GXZ4 949 aa6.81□□□□□ -1.32
ATXN3-223ENST00000553686 C17orf102A2RUQ5 167 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 TMEM8BA6NDV4 472 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 HAS3O00219 553 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 PLA2G6O60733 806 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 GAS7O60861 476 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 F2P00734 622 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 STAG3L1P0CL83 205 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 STAT5BP51692 787 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-223ENST00000553686 KCNC3Q14003 757 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 PCBP1Q15365 356 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-223ENST00000553686 TBR1Q16650 682 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 SPECC1Q5M775 1068 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 CCDC62Q6P9F0 684 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 CHST3Q7LGC8 479 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-223ENST00000553686 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF287Q9HBT7 754 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-223ENST00000553686 FBXO4Q9UKT5 387 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 PNMA2Q9UL42 364 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 RAB23Q9ULC3 237 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
ATXN3-223ENST00000553686 SIPA1L1O43166 1804 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 UBA6A0AVT1 1052 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF891A8MT65 544 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 TTLL1O95922 423 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 ICAM1P05362 532 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 EDNRBP24530 442 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 CALML3P27482 149 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms