RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 HESX1Q9UBX0 185 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 LIMA1Q9UHB6 759 aaKnown RBP24.12■■□□□ 1.45
TDP1-206ENST00000553569 HEPACAM2A8MVW5 462 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 HHLA1C9JL84 531 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 DPYSL4O14531 572 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 CFHP08603 1231 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 SRFP11831 508 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 ATP1A3P13637 1013 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 AVPR1AP37288 418 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 USP8P40818 1118 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 ZNF132P52740 706 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 FKBP15Q5T1M5 1219 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 VITQ6UXI7 678 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 TRIM67Q6ZTA4 783 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 MON1AQ86VX9 555 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 TTC30AQ86WT1 665 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 CMTM8Q8IZV2 173 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 ANKRD52Q8NB46 1076 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 RSPRY1Q96DX4 576 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 TRPV4Q9HBA0 871 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 ZMYM5Q9UJ78 669 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 DNAJC12Q9UKB3 198 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 KIAA1257Q9ULG3 409 aa24.11■■□□□ 1.45
TDP1-206ENST00000553569 TRAV19A0A0A6YYK7 116 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 C2orf78A6NCI8 922 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 BECN2A8MW95 431 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 O00370 1275 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 BCAT1P54687 386 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 SLC8A3P57103 927 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 GMIPQ9P107 970 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 FBXL21Q9UKT6 434 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 TECTAO75443 2155 aa24.1■■□□□ 1.45
TDP1-206ENST00000553569 ZNF840PA6NDX5 716 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 TMEM221A6NGB7 291 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 M0R296 226 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 GPC5P78333 572 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 ARL14EPQ8N8R7 260 aaPredicted RBP24.09■■□□□ 1.45
TDP1-206ENST00000553569 PDZD8Q8NEN9 1154 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 UBA3Q8TBC4 463 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 SLC22A12Q96S37 553 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 ZSWIM1Q9BR11 485 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 C1QTNF1Q9BXJ1 281 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 FBXO44Q9H4M3 255 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 PNPLA8Q9NP80 782 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 C11orf16Q9NQ32 467 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 COMMD8Q9NX08 183 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 IL37Q9NZH6 218 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 CNTN6Q9UQ52 1028 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 FHOD1Q9Y613 1164 aa24.09■■□□□ 1.45
TDP1-206ENST00000553569 LGALS16A8MUM7 142 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 M0QYV0 167 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 CKMP06732 381 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 PPP3CCP48454 512 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 KLK7P49862 253 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 PDE4CQ08493 712 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 BST2Q10589 180 aaKnown RBP24.08■■□□□ 1.45
TDP1-206ENST00000553569 RAPGEF1Q13905 1077 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 KLHDC7AQ5VTJ3 777 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 DPY19L2P1Q6NXN4 242 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 PIGZQ86VD9 579 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 TTC16Q8NEE8 873 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 DEPDC1BQ8WUY9 529 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 OVCA2Q8WZ82 227 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 SHC3Q92529 594 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 E2F7Q96AV8 911 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 CYP2S1Q96SQ9 504 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 CBX8Q9HC52 389 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 CHORDC1Q9UHD1 332 aaPredicted RBP24.08■■□□□ 1.45
TDP1-206ENST00000553569 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.08■■□□□ 1.45
TDP1-206ENST00000553569 CCL26Q9Y258 94 aa24.08■■□□□ 1.45
TDP1-206ENST00000553569 HELZP42694 1942 aaKnown RBP24.08■■□□□ 1.44
TDP1-206ENST00000553569 TULP2O00295 520 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 CYP26A1O43174 497 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 USP17L7P0C7H9 530 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 PNMA6AP0CW24 399 aaPredicted RBP24.07■■□□□ 1.44
TDP1-206ENST00000553569 PSMC3P17980 439 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 WEE1P30291 646 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 IQCB1Q15051 598 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 TMEM31Q5JXX7 168 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 LCLAT1Q6UWP7 414 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 YAF2Q8IY57 180 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 USP13Q92995 863 aaPredicted RBP24.07■■□□□ 1.44
TDP1-206ENST00000553569 ASIC4Q96FT7 647 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 TRMT61BQ9BVS5 477 aaKnown RBP24.07■■□□□ 1.44
TDP1-206ENST00000553569 ACP6Q9NPH0 428 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 SLC2A4RGQ9NR83 387 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 CA14Q9ULX7 337 aa24.07■■□□□ 1.44
TDP1-206ENST00000553569 FAM92AA1XBS5 289 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 SOBPA7XYQ1 873 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 XPO1O14980 1071 aaKnown RBP24.06■■□□□ 1.44
TDP1-206ENST00000553569 THAP12O43422 761 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 SETSIPP0DME0 302 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 HDCP19113 662 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 GNA15P30679 374 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 GDI1P31150 447 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 KIF11P52732 1056 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 UBXN1Q04323 297 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 STILQ15468 1287 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 CNGA2Q16280 664 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 APTXQ7Z2E3 356 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms